Detailed information of evm.model.Ap3.1290 in Astrangia poculata

Genomic Location: Ap3:14580010...14603469
NR annotation: XP_020616342.1, TBC1 domain family member 10A-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P58802TBC1 domain family member 10A OS=Mus musculus OX=10090 GN=Tbc1d10a PE=1 SV=1
Q4KMP7TBC1 domain family member 10B OS=Homo sapiens OX=9606 GN=TBC1D10B PE=1 SV=3
Q9BXI6TBC1 domain family member 10A OS=Homo sapiens OX=9606 GN=TBC1D10A PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006384 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00566
all species →		RabGAP-TBCRab-GTPase-TBC domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000195
all species →		DomainRab-GAP-TBC domainInterproscan
IPR035969
all species →		Homologous_superfamilyRab-GAP-TBC domain superfamilyInterproscan
IPR050302
all species →		FamilyRab GTPase-activating TBC domain-containing proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47219
all species →		RAB GTPASE-ACTIVATING PROTEIN 1-LIKEInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap3.1290. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K19944TBC1D10; TBC1 domain family member 10-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP