Detailed information of evm.model.Ap3.1359 in Astrangia poculata

Genomic Location: Ap3:15535280...15536278
NR annotation: no NCBI-NR hit recorded
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16622
all species →		zf-C2H2_11zinc-finger C2H2-typeDomainInterproscan
PF12800
all species →		Fer4_44Fe-4S binding domainDomainInterproscan
PF00096
all species →		zf-C2H2Zinc finger, C2H2 typeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087
all species →		DomainZinc finger C2H2-typeInterproscan
IPR041697
all species →		DomainZinc-finger C2H2-type 11Interproscan
IPR017896
all species →		Domain4Fe-4S ferredoxin-type, iron-sulphur binding domainInterproscan
IPR036236
all species →		Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24399
all species →		ZINC FINGER AND BTB DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000978
all species →		Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0001227
all species →		Molecular FunctionDNA-binding transcription repressor activity, RNA polymerase II-specificInterproscan
GO:0005654
all species →		Cellular ComponentnucleoplasmInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap3.1359.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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