Detailed information of evm.model.Ap3.1439 in Astrangia poculata

Genomic Location: Ap3:16479829...16481031
NR annotation: XP_020624860.1, carbohydrate sulfotransferase 1-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9EQC0Carbohydrate sulfotransferase 1 OS=Mus musculus OX=10090 GN=Chst1 PE=1 SV=1
Q9QUP4Carbohydrate sulfotransferase 5 OS=Mus musculus OX=10090 GN=Chst5 PE=2 SV=1
Q5RJQ0Carbohydrate sulfotransferase 1 OS=Rattus norvegicus OX=10116 GN=Chst1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005979 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13469
all species →		Sulfotransfer_3Sulfotransferase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051135
all species →		FamilyGal/GlcNAc/GalNAc SulfotransferaseInterproscan
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10704
all species →		CARBOHYDRATE SULFOTRANSFERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0001517
all species →		Molecular FunctionN-acetylglucosamine 6-O-sulfotransferase activityInterproscan
GO:0006044
all species →		Biological ProcessN-acetylglucosamine metabolic processInterproscan
GO:0006790
all species →		Biological Processsulfur compound metabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap3.1439.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP