Genomic Location: Ap3:16905459...16921772
NR annotation: KAJ7387544.1, ADP-ribosylation factor protein 1 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap3.1484 |
| Transcript |
| evm.model.Ap3.1484 |
| Protein |
| evm.model.Ap3.1484 |
| UniProt accession | Description |
|---|---|
| Q32LJ2 | ADP-ribosylation factor-related protein 1 OS=Bos taurus OX=9913 GN=ARFRP1 PE=2 SV=1 |
| Q8BXL7 | ADP-ribosylation factor-related protein 1 OS=Mus musculus OX=10090 GN=Arfrp1 PE=1 SV=2 |
| Q63055 | ADP-ribosylation factor-related protein 1 OS=Rattus norvegicus OX=10116 GN=Arfrp1 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0007699 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00025 all species → | Arf | ADP-ribosylation factor family | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006689 all species → | Family | Small GTPase superfamily, ARF/SAR type | Interproscan |
| IPR027417 all species → | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR005225 all species → | Domain | Small GTP-binding protein domain | Interproscan |
| IPR024156 all species → | Family | Small GTPase superfamily, ARF type | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45909 all species → | ADP-RIBOSYLATION FACTOR-RELATED PROTEIN 1 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003924 all species → | Molecular Function | GTPase activity | Interproscan |
| GO:0005525 all species → | Molecular Function | GTP binding | Interproscan |
| GO:0005794 all species → | Cellular Component | Golgi apparatus | Interproscan |
| GO:0006886 all species → | Biological Process | intracellular protein transport | Interproscan |
| GO:0034067 all species → | Biological Process | protein localization to Golgi apparatus | Interproscan |
| GO:0043001 all species → | Biological Process | Golgi to plasma membrane protein transport | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K07952 | ARFRP1; ADP-ribosylation factor related protein 1 | - | GTP-binding proteins | ko04031 | deepkoala |
Transcript abundance of evm.model.Ap3.1484 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
