Detailed information of evm.model.Ap3.1504 in Astrangia poculata

Genomic Location: Ap3:17132704...17156610
NR annotation: XP_027060282.1, WASH complex subunit 5-like [Pocillopora damicornis]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7ZVM1WASH complex subunit 5 OS=Danio rerio OX=7955 GN=washc5 PE=2 SV=1
Q12768WASH complex subunit 5 OS=Homo sapiens OX=9606 GN=WASHC5 PE=1 SV=1
Q5R5P0WASH complex subunit 5 OS=Pongo abelii OX=9601 GN=WASHC5 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002378 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10266
all species →		StrumpellinHereditary spastic paraplegia protein strumpellinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019393
all species →		FamilyWASH complex, subunit strumpellinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15691
all species →		WASH COMPLEX SUBUNIT 5Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005768
all species →		Cellular ComponentendosomeInterproscan
GO:0007032
all species →		Biological Processendosome organizationInterproscan
GO:0030041
all species →		Biological Processactin filament polymerizationInterproscan
GO:0051125
all species →		Biological Processregulation of actin nucleationInterproscan
GO:0071203
all species →		Cellular ComponentWASH complexInterproscan
GO:0140285
all species →		Biological Processendosome fissionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K18464RTSC, SPG8; WASH complex subunit strumpellin-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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