Detailed information of evm.model.Ap3.1526 in Astrangia poculata

Genomic Location: Ap3:17219278...17219682
NR annotation: KAJ7387599.1, YmL15 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5ZKT8Large ribosomal subunit protein uL15m OS=Gallus gallus OX=9031 GN=MRPL15 PE=2 SV=1
Q6DGM3Large ribosomal subunit protein uL15m OS=Danio rerio OX=7955 GN=mrpl15 PE=2 SV=1
Q6AZN4Large ribosomal subunit protein uL15m OS=Xenopus laevis OX=8355 GN=mrpl15 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005029 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00828
all species →		Ribosomal_L27ARibosomal proteins 50S-L15, 50S-L18e, 60S-L27AFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005749
all species →		FamilyLarge ribosomal subunit protein uL15, bacterial-typeInterproscan
IPR036227
all species →		Homologous_superfamilyLarge ribosomal subunit protein uL15/eL18 superfamilyInterproscan
IPR021131
all species →		DomainLarge ribosomal subunit protein uL15/eL18Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12934
all species →		50S RIBOSOMAL PROTEIN L15Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005762
all species →		Cellular Componentmitochondrial large ribosomal subunitInterproscan
GO:0006412
all species →		Biological ProcesstranslationInterproscan
GO:0015934
all species →		Cellular Componentlarge ribosomal subunitInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap3.1526.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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