Detailed information of evm.model.Ap3.1661 in Astrangia poculata

Genomic Location: Ap3:18512566...18519728
NR annotation: CAH3149793.1, unnamed protein product [Porites lobata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9W704RPA-interacting protein A OS=Xenopus laevis OX=8355 GN=rpain-a PE=1 SV=1
Q5M782RPA-interacting protein B OS=Xenopus laevis OX=8355 GN=rpain-b PE=2 SV=2
Q86UA6RPA-interacting protein OS=Homo sapiens OX=9606 GN=RPAIN PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007467 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14768
all species →		RPA_interact_CReplication protein A interacting C-terminalFamilyInterproscan
PF14767
all species →		RPA_interact_MReplication protein A interacting middleFamilyInterproscan
PF14766
all species →		RPA_interact_NReplication protein A interacting N-terminalFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR028159
all species →		DomainRPA-interacting protein, C-terminal domainInterproscan
IPR028155
all species →		DomainRPA-interacting protein, central domainInterproscan
IPR028156
all species →		FamilyRPA-interacting proteinInterproscan
IPR028158
all species →		DomainRPA-interacting protein, N-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31742
all species →		RPA-INTERACTING PROTEIN RPAINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006606
all species →		Biological Processprotein import into nucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap3.1661.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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