Genomic Location: Ap3:19360904...19369561
NR annotation: XP_020629801.1, probable 18S rRNA (guanine-N(7))-methyltransferase isoform X1 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap3.1762 |
| Transcript |
| evm.model.Ap3.1762 |
| Protein |
| evm.model.Ap3.1762 |
| UniProt accession | Description |
|---|---|
| O43709 | 18S rRNA (guanine-N(7))-methyltransferase OS=Homo sapiens OX=9606 GN=BUD23 PE=1 SV=2 |
| Q9CY21 | 18S rRNA (guanine-N(7))-methyltransferase OS=Mus musculus OX=10090 GN=Bud23 PE=1 SV=1 |
| Q58DP0 | 18S rRNA (guanine-N(7))-methyltransferase OS=Bos taurus OX=9913 GN=BUD23 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0006293 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08241 all species → | Methyltransf_11 | Methyltransferase domain | Domain | Interproscan |
| PF12589 all species → | WBS_methylT | Methyltransferase involved in Williams-Beuren syndrome | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR029063 all species → | Homologous_superfamily | S-adenosyl-L-methionine-dependent methyltransferase superfamily | Interproscan |
| IPR013216 all species → | Domain | Methyltransferase type 11 | Interproscan |
| IPR022238 all species → | Domain | 18S rRNA (guanine(1575)-N(7))-methyltransferase Bud23, C-terminal | Interproscan |
| IPR039769 all species → | Family | 18S rRNA (guanine(1575)-N(7))-methyltransferase Bud23-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12734 all species → | METHYLTRANSFERASE-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0008757 all species → | Molecular Function | S-adenosylmethionine-dependent methyltransferase activity | Interproscan |
| GO:0016435 all species → | Molecular Function | rRNA (guanine) methyltransferase activity | Interproscan |
| GO:0070476 all species → | Biological Process | rRNA (guanine-N7)-methylation | Interproscan |
| GO:0005730 all species → | Cellular Component | nucleolus | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K19306 | BUD23; 18S rRNA (guanine1575-N7)-methyltransferase | EC:2.1.1.309 | Ribosome biogenesis | ko03009 | deepkoala |
Transcript abundance of evm.model.Ap3.1762 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
