Detailed information of evm.model.Ap3.1856 in Astrangia poculata

Genomic Location: Ap3:20185389...20187338
NR annotation: KAJ7387488.1, hypothetical protein OS493_000818 [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7XM31Probable RNA-dependent RNA polymerase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RDR2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001327 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05183
all species →		RdRPRNA dependent RNA polymeraseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007855
all species →		FamilyRNA-dependent RNA polymerase, eukaryotic-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23079
all species →		RNA-DEPENDENT RNA POLYMERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003968
all species →		Molecular FunctionRNA-dependent RNA polymerase activityInterproscan
GO:0030422
all species →		Biological ProcesssiRNA processingInterproscan
GO:0031380
all species →		Cellular Componentnuclear RNA-directed RNA polymerase complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap3.1856.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP