Detailed information of evm.model.Ap3.2045.1.5f15e660 in Astrangia poculata

Genomic Location: Ap3:22251992...22264545
NR annotation: XP_020630706.1, uncharacterized protein LOC110067683 isoform X4 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002137 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05270
all species →		AbfBAlpha-L-arabinofuranosidase B (ABFB) domainDomainInterproscan
PF21744
all species →		BAHCC1-like_TudorBAHCC1-like, Tudor domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007934
all species →		DomainAlpha-L-arabinofuranosidase B, arabinose-binding domainInterproscan
IPR036195
all species →		Homologous_superfamilyAlpha-L-arabinofuranosidase B, arabinose-binding domain superfamilyInterproscan
IPR048924
all species →		DomainBAHCC1-like, Tudor domainInterproscan

 PANTHER
No PANTHER signature was detected for evm.model.Ap3.2045.1.5f15e660. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0046373
all species →		Biological ProcessL-arabinose metabolic processInterproscan
GO:0046556
all species →		Molecular Functionalpha-L-arabinofuranosidase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap3.2045.1.5f15e660.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP