Genomic Location: Ap3:22319674...22327267
NR annotation: XP_020630711.1, peptidyl-prolyl cis-trans isomerase FKBP12-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap3.2051.1.5f15e662 |
| Transcript |
| evm.model.Ap3.2051.1.5f15e662 |
| Protein |
| evm.model.Ap3.2051.1.5f15e662 |
| UniProt accession | Description |
|---|---|
| Q8LGG0 | Peptidyl-prolyl cis-trans isomerase FKBP12 OS=Arabidopsis thaliana OX=3702 GN=FKBP12 PE=1 SV=2 |
| O04287 | Peptidyl-prolyl cis-trans isomerase FKBP12 OS=Vicia faba OX=3906 GN=FKBP12 PE=1 SV=1 |
| Q754K8 | FK506-binding protein 1 OS=Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=FPR1 PE=3 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000459 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00254 all species → | FKBP_C | FKBP-type peptidyl-prolyl cis-trans isomerase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR050689 all species → | Family | FKBP-type Peptidyl-prolyl cis-trans Isomerase | Interproscan |
| IPR046357 all species → | Homologous_superfamily | Peptidyl-prolyl cis-trans isomerase domain superfamily | Interproscan |
| IPR001179 all species → | Domain | FKBP-type peptidyl-prolyl cis-trans isomerase domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10516 all species → | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005737 all species → | Cellular Component | cytoplasm | Interproscan |
| GO:0003755 all species → | Molecular Function | peptidyl-prolyl cis-trans isomerase activity | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K01802 | E5.2.1.8; peptidylprolyl isomerase | EC:5.2.1.8 | Enzymes with EC numbers | - | deepkoala |
Transcript abundance of evm.model.Ap3.2051.1.5f15e662 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
