Detailed information of evm.model.Ap3.2116 in Astrangia poculata

Genomic Location: Ap3:22971044...22977226
NR annotation: XP_015756349.1, PREDICTED: ribonuclease UK114-like [Acropora digitifera]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P527582-iminobutanoate/2-iminopropanoate deaminase OS=Homo sapiens OX=9606 GN=RIDA PE=1 SV=1
Q3T1142-iminobutanoate/2-iminopropanoate deaminase OS=Bos taurus OX=9913 GN=RIDA PE=2 SV=3
P806012-iminobutanoate/2-iminopropanoate deaminase OS=Capra hircus OX=9925 GN=RIDA PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003354 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01042
all species →		Ribonuc_L-PSPEndoribonuclease L-PSPDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006175
all species →		FamilyYjgF/YER057c/UK114 familyInterproscan
IPR035959
all species →		Homologous_superfamilyRutC-like superfamilyInterproscan
IPR006056
all species →		FamilyRidA familyInterproscan
IPR019897
all species →		Conserved_siteRidA, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11803
all species →		2-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0019239
all species →		Molecular Functiondeaminase activityInterproscan
GO:1901565
all species →		Biological Processobsolete organonitrogen compound catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap3.2116.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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