Gene detail

Detailed information of evm.model.Ap3.2155 in Astrangia poculata

Genomic Location: Ap3:23496922...23499449
NR annotation: KAJ7374163.1, Eukaryotic translation elongation factor 1 epsilon-1 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O43324	Eukaryotic translation elongation factor 1 epsilon-1 OS=Homo sapiens OX=9606 GN=EEF1E1 PE=1 SV=1
P70102	Eukaryotic translation elongation factor 1 epsilon-1 OS=Cricetulus griseus OX=10029 GN=EEF1E1 PE=2 SV=1
Q9D1M4	Eukaryotic translation elongation factor 1 epsilon-1 OS=Mus musculus OX=10090 GN=Eef1e1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008130 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14497 all species →	GST_C_3	Glutathione S-transferase, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042450 all species →	Family	Eukaryotic translation elongation factor 1 epsilon-1	Interproscan
IPR010987 all species →	Domain	Glutathione S-transferase, C-terminal-like	Interproscan
IPR036282 all species →	Homologous_superfamily	Glutathione S-transferase, C-terminal domain superfamily	Interproscan
IPR004046 all species →	Domain	Glutathione S-transferase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44490 all species →	EUKARYOTIC TRANSLATION ELONGATION FACTOR 1 EPSILON-1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0017101 all species →	Cellular Component	aminoacyl-tRNA synthetase multienzyme complex	Interproscan
GO:0043517 all species →	Biological Process	positive regulation of DNA damage response, signal transduction by p53 class mediator	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15439	EEF1E1, AIMP3; eukaryotic translation elongation factor 1 epsilon-1	-	Transfer RNA biogenesis	ko03016	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.