Gene detail

Detailed information of evm.model.Ap3.2233 in Astrangia poculata

Genomic Location: Ap3:24350540...24366868
NR annotation: XP_020631772.1, citron Rho-interacting kinase-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap3.2233

atgttctgttttctcgttatttcgtatgaatgttaccaggaaacggagaaagaagtggaaacattatcgcgctacaagaggcagttggaaaatacaaacagcagactagagagcgagttagaggaaacgaaaaagctcatggcgtcaagagatcagaaaattgacactttgactggaaagtgtcggacgttggaagaaatgctcaaggaaaacgttgacctcagcagaagaagctcagagggagataataaaaacactactggaaaatcagccataaacgaagcagaattggagaggttgtgcgaggagagagaagtaatgacaagaaagctagcaggactggaaagtgacctgaagatgcagcaacagaaaaacgtgtctgtggaaaaacaacttgaagatgcagaaagtaaagtgaaacagctttcgaaggacatggaccgaaaggttaaagacctcgacacgcaactgagcgaggtctcgacggagtgttccacactaaagagcactaagaaggcactagaggagactatccttaaacttgagaatgatattgacaccagagaattcgagttagaactcaaggccgccgctaggcaagataagattaccagaactatgcaggagaatcgttcagaggttgtccaagaaatgcacgagcaacttggtgaaatgtctgatcgctgcaacgaagtggtatcacaaaataaggagctggaaaagaaggtggaagaactcacagaagagaattgcgatcttaagatggcgaaagagaaatttgaagatgaactgaacgagaaaaagagagcagcagaaggcattgaatttactaactcgatgttgaaatctacctgcaccatgctggaaaaccaagtcgaagagctggagatcattaacgaagactttgaggagaagcaattacagtggaatgtagcaaggaaagagttggagcagaaaatagagaaaagtgatggtgaacttttggaagctcagcgctccttggaacagcagaaactggcacgctctggcgctgaagagaaagtgaccaagctgcaagaggcgttgaaggaagtgcaaaagacgcatatcaaggaagttgacgagatgaacgcacaactggaaagacaaagagagcgaactgaggagctcacggaagcgctcagcgaagcagagacgaaatctggcatggcgcagctcgacgttaaatccttggaacgcaaacttcaacttcaaatcgaggacaacaacaagcttgagatcgaggtcgagcgactgaacagtcacacgtccaagctgaaggccagtaacttcgagttaaaccagaatatagaggcagccatggagaaatgtgacgagcttacatgtgaacgcgccgcactagctgaacagctggatcttatggaggcctcgcacgctgaggaacgcctgaagctagaggcgactagctcacagcagactaagcttatagacttcctacaatgcaaggctgaaggacaggcacctaagaagaaaaagctcattggcggcggtggaaagtcatggcgtaagaaaccagaaaacaacatcaatgtggtgccacagcaatggcgagacttgcaaaaggcgctggagaaagaaagagcgtccagtcttaaactacaaactgaggtcaacaggattcgtcaagaaatgcaggctgccaaaatggaagctgcgcattggaaatcacagcatcaaagtgctaacaatgccacacccaaaccggcccagacttacgcggtcttgtcagcgatccaacaatcacctagcaaccagccgagtccgttaggcgcccagaaccagttgaagaatgctaatgctactccagccggccgcgggacttcacacagacctaaagagagaatgcatcacaatattccacacagatttgtgaacgccctgaatatgcgcgccaccaagtgtgccacttgtctggatacccttcacttcgtgcgaccctcgtctcgttgcgctgagtgtggcctggtttgtcatgtaaagtgtgcaccaaatctcccacgtacctgcggcctgccgagccagtttgtggaacactttagtgagactcttcaggaacagaagaacgacgaaaatgacaaaaccaactcacagagctccactaggctgggaggcagaagagaaggatggctgcgggttccacgttgcggctccgtgaagcatggatgggagaagaaatgggttgttgtcgacgatcaaatgttacaacttttcgacaaggaaaatatgggagaaaactcatctccatcagaggtgttgcacctgtgcggcaaagacggtcacgtgactgttcactctgccgtcatgtcatcagaactgatgggtaccgcccccaccgacctgccttacatactgagggtggagtcacgacagagatgctggcctgttcagaacctctacttactggcgccttcattccctgtcaaacagaaatgggtcacctctttggagtttgtgctggatgagataaagaagaaaaacaacaatggcgaggatcagaaactaatgggcaacgtgttactgcatttagaggaaggcgagcgcctggacatcaattgtaccaagctactaaatgacgagttggttctccttggtgccgaagagggtctatattccttgtctcttgagaacccaggcaaaaactcgcctcgcgccattcctggaatagagagagcctttcaaatcgatatccttagtgatctgaaccttgccatcatgattgcaggcaaggaccgccagttgtgtagtgtggatcttaagcaacttaccagccgagcgcgtcaagtaaactctgctgtaccactcactacgctgagctcacaaggaatagagaagattacaaactgccatttgttcgctgtaggacagtgtgaggataattactacgtttgcgctgcgactcctaacagcatcctgttgttgcgatacaacgctagcattgggacgttttgcacccgcaaggagatcgagacaagcgagccatgtaactgcattcattttagcaagagtcacgtgatctatggtactggcaagttctacagcttggatatcaagcaacacactgttaaagaatttcttgactccaaggacccttcattagcgttcgcagtgtatggagcctcgcagctgaacatctttcctattgcagtgctggatgtaaccactgcaggctcaaacaaggaagagctgctactttgttttaacgagtttggcgtgtttgtgaacagctctggttgtcacagcaggaaaaagcctttgatgtggtgcagactgccccttgcttttgcttacagtgagccattcctgtttgtcactcattttaattccatcgacgtgtgtgaaattccaccaagtactgctgagaatcccagccgctatgtgcacaagtttctggaaattcaaaatccacgggtccttagtccagcggtatctcccggcgcggtctacctcgcttccacgttacatgagcaagtggagatgttgtgtttccaaggcaacgcagctcccgccagtgtcttccaacccgaggacgacgacgacagcatgtcgatcatttccgagctgtcacgactgtcgagcccgagccgccgatcgtcgatgttggctcgttccccttcgtggagtcccggttctgcccgagtgaagtcgttgaaaggcatttgccctaaaaagagcagctcatttcgcacagttaaaccgctgacagaagaaaacatgtga

Transcript

evm.model.Ap3.2233

ATGTTCTGTTTTCTCGTTATTTCGTATGAATGTTACCAGGAAACGGAGAAAGAAGTGGAAACATTATCGCGCTACAAGAGGCAGTTGGAAAATACAAACAGCAGACTAGAGAGCGAGTTAGAGGAAACGAAAAAGCTCATGGCGTCAAGAGATCAGAAAATTGACACTTTGACTGGAAAGTGTCGGACGTTGGAAGAAATGCTCAAGGAAAACGTTGACCTCAGCAGAAGAAGCTCAGAGGGAGATAATAAAAACACTACTGGAAAATCAGCCATAAACGAAGCAGAATTGGAGAGGTTGTGCGAGGAGAGAGAAGTAATGACAAGAAAGCTAGCAGGACTGGAAAGTGACCTGAAGATGCAGCAACAGAAAAACGTGTCTGTGGAAAAACAACTTGAAGATGCAGAAAGTAAAGTGAAACAGCTTTCGAAGGACATGGACCGAAAGGTTAAAGACCTCGACACGCAACTGAGCGAGGTCTCGACGGAGTGTTCCACACTAAAGAGCACTAAGAAGGCACTAGAGGAGACTATCCTTAAACTTGAGAATGATATTGACACCAGAGAATTCGAGTTAGAACTCAAGGCCGCCGCTAGGCAAGATAAGATTACCAGAACTATGCAGGAGAATCGTTCAGAGGTTGTCCAAGAAATGCACGAGCAACTTGGTGAAATGTCTGATCGCTGCAACGAAGTGGTATCACAAAATAAGGAGCTGGAAAAGAAGGTGGAAGAACTCACAGAAGAGAATTGCGATCTTAAGATGGCGAAAGAGAAATTTGAAGATGAACTGAACGAGAAAAAGAGAGCAGCAGAAGGCATTGAATTTACTAACTCGATGTTGAAATCTACCTGCACCATGCTGGAAAACCAAGTCGAAGAGCTGGAGATCATTAACGAAGACTTTGAGGAGAAGCAATTACAGTGGAATGTAGCAAGGAAAGAGTTGGAGCAGAAAATAGAGAAAAGTGATGGTGAACTTTTGGAAGCTCAGCGCTCCTTGGAACAGCAGAAACTGGCACGCTCTGGCGCTGAAGAGAAAGTGACCAAGCTGCAAGAGGCGTTGAAGGAAGTGCAAAAGACGCATATCAAGGAAGTTGACGAGATGAACGCACAACTGGAAAGACAAAGAGAGCGAACTGAGGAGCTCACGGAAGCGCTCAGCGAAGCAGAGACGAAATCTGGCATGGCGCAGCTCGACGTTAAATCCTTGGAACGCAAACTTCAACTTCAAATCGAGGACAACAACAAGCTTGAGATCGAGGTCGAGCGACTGAACAGTCACACGTCCAAGCTGAAGGCCAGTAACTTCGAGTTAAACCAGAATATAGAGGCAGCCATGGAGAAATGTGACGAGCTTACATGTGAACGCGCCGCACTAGCTGAACAGCTGGATCTTATGGAGGCCTCGCACGCTGAGGAACGCCTGAAGCTAGAGGCGACTAGCTCACAGCAGACTAAGCTTATAGACTTCCTACAATGCAAGGCTGAAGGACAGGCACCTAAGAAGAAAAAGCTCATTGGCGGCGGTGGAAAGTCATGGCGTAAGAAACCAGAAAACAACATCAATGTGGTGCCACAGCAATGGCGAGACTTGCAAAAGGCGCTGGAGAAAGAAAGAGCGTCCAGTCTTAAACTACAAACTGAGGTCAACAGGATTCGTCAAGAAATGCAGGCTGCCAAAATGGAAGCTGCGCATTGGAAATCACAGCATCAAAGTGCTAACAATGCCACACCCAAACCGGCCCAGACTTACGCGGTCTTGTCAGCGATCCAACAATCACCTAGCAACCAGCCGAGTCCGTTAGGCGCCCAGAACCAGTTGAAGAATGCTAATGCTACTCCAGCCGGCCGCGGGACTTCACACAGACCTAAAGAGAGAATGCATCACAATATTCCACACAGATTTGTGAACGCCCTGAATATGCGCGCCACCAAGTGTGCCACTTGTCTGGATACCCTTCACTTCGTGCGACCCTCGTCTCGTTGCGCTGAGTGTGGCCTGGTTTGTCATGTAAAGTGTGCACCAAATCTCCCACGTACCTGCGGCCTGCCGAGCCAGTTTGTGGAACACTTTAGTGAGACTCTTCAGGAACAGAAGAACGACGAAAATGACAAAACCAACTCACAGAGCTCCACTAGGCTGGGAGGCAGAAGAGAAGGATGGCTGCGGGTTCCACGTTGCGGCTCCGTGAAGCATGGATGGGAGAAGAAATGGGTTGTTGTCGACGATCAAATGTTACAACTTTTCGACAAGGAAAATATGGGAGAAAACTCATCTCCATCAGAGGTGTTGCACCTGTGCGGCAAAGACGGTCACGTGACTGTTCACTCTGCCGTCATGTCATCAGAACTGATGGGTACCGCCCCCACCGACCTGCCTTACATACTGAGGGTGGAGTCACGACAGAGATGCTGGCCTGTTCAGAACCTCTACTTACTGGCGCCTTCATTCCCTGTCAAACAGAAATGGGTCACCTCTTTGGAGTTTGTGCTGGATGAGATAAAGAAGAAAAACAACAATGGCGAGGATCAGAAACTAATGGGCAACGTGTTACTGCATTTAGAGGAAGGCGAGCGCCTGGACATCAATTGTACCAAGCTACTAAATGACGAGTTGGTTCTCCTTGGTGCCGAAGAGGGTCTATATTCCTTGTCTCTTGAGAACCCAGGCAAAAACTCGCCTCGCGCCATTCCTGGAATAGAGAGAGCCTTTCAAATCGATATCCTTAGTGATCTGAACCTTGCCATCATGATTGCAGGCAAGGACCGCCAGTTGTGTAGTGTGGATCTTAAGCAACTTACCAGCCGAGCGCGTCAAGTAAACTCTGCTGTACCACTCACTACGCTGAGCTCACAAGGAATAGAGAAGATTACAAACTGCCATTTGTTCGCTGTAGGACAGTGTGAGGATAATTACTACGTTTGCGCTGCGACTCCTAACAGCATCCTGTTGTTGCGATACAACGCTAGCATTGGGACGTTTTGCACCCGCAAGGAGATCGAGACAAGCGAGCCATGTAACTGCATTCATTTTAGCAAGAGTCACGTGATCTATGGTACTGGCAAGTTCTACAGCTTGGATATCAAGCAACACACTGTTAAAGAATTTCTTGACTCCAAGGACCCTTCATTAGCGTTCGCAGTGTATGGAGCCTCGCAGCTGAACATCTTTCCTATTGCAGTGCTGGATGTAACCACTGCAGGCTCAAACAAGGAAGAGCTGCTACTTTGTTTTAACGAGTTTGGCGTGTTTGTGAACAGCTCTGGTTGTCACAGCAGGAAAAAGCCTTTGATGTGGTGCAGACTGCCCCTTGCTTTTGCTTACAGTGAGCCATTCCTGTTTGTCACTCATTTTAATTCCATCGACGTGTGTGAAATTCCACCAAGTACTGCTGAGAATCCCAGCCGCTATGTGCACAAGTTTCTGGAAATTCAAAATCCACGGGTCCTTAGTCCAGCGGTATCTCCCGGCGCGGTCTACCTCGCTTCCACGTTACATGAGCAAGTGGAGATGTTGTGTTTCCAAGGCAACGCAGCTCCCGCCAGTGTCTTCCAACCCGAGGACGACGACGACAGCATGTCGATCATTTCCGAGCTGTCACGACTGTCGAGCCCGAGCCGCCGATCGTCGATGTTGGCTCGTTCCCCTTCGTGGAGTCCCGGTTCTGCCCGAGTGAAGTCGTTGAAAGGCATTTGCCCTAAAAAGAGCAGCTCATTTCGCACAGTTAAACCGCTGACAGAAGAAAACATGTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O14578	Citron Rho-interacting kinase OS=Homo sapiens OX=9606 GN=CIT PE=1 SV=2
E9PSL7	Citron rho-interacting kinase OS=Rattus norvegicus OX=10116 GN=Cit PE=1 SV=1
P49025	Citron Rho-interacting kinase OS=Mus musculus OX=10090 GN=Cit PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003907 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00130 all species →	C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	Domain	Interproscan
PF00780 all species →	CNH	CNH domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050839 all species →	Family	Rho-associated Serine/Threonine Kinase	Interproscan
IPR002219 all species →	Domain	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	Interproscan
IPR001180 all species →	Domain	Citron homology (CNH) domain	Interproscan
IPR046349 all species →	Homologous_superfamily	C1-like domain superfamily	Interproscan
IPR001849 all species →	Domain	Pleckstrin homology domain	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22988 all species →	MYOTONIC DYSTROPHY S/T KINASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005856 all species →	Cellular Component	cytoskeleton	Interproscan
GO:0018107 all species →	Biological Process	peptidyl-threonine phosphorylation	Interproscan
GO:0031032 all species →	Biological Process	actomyosin structure organization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16308	CIT; citron Rho-interacting kinase	EC:2.7.11.35	Protein kinases	ko01001	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.