Detailed information of evm.model.Ap3.2263 in Astrangia poculata

Genomic Location: Ap3:24665838...24676394
NR annotation: KAJ7374064.1, Mitochondrial sodium/calcium exchanger protein [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
F1NXU8Mitochondrial sodium/calcium exchanger protein OS=Gallus gallus OX=9031 GN=SLC8B1 PE=3 SV=4
Q925Q3Mitochondrial sodium/calcium exchanger protein OS=Mus musculus OX=10090 GN=Slc8b1 PE=2 SV=2
Q6J4K2Mitochondrial sodium/calcium exchanger protein OS=Homo sapiens OX=9606 GN=SLC8B1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002683 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01699
all species →		Na_Ca_exSodium/calcium exchanger proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR044880
all species →		Homologous_superfamilyNCX, central ion-binding domain superfamilyInterproscan
IPR004837
all species →		DomainSodium/calcium exchanger membrane regionInterproscan
IPR051359
all species →		FamilyCalcium:cation antiporterInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12266
all species →		NA+/CA2+ K+ INDEPENDENT EXCHANGERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0055085
all species →		Biological Processtransmembrane transportInterproscan
GO:0005432
all species →		Molecular Functioncalcium:sodium antiporter activityInterproscan
GO:0006812
all species →		Biological Processmonoatomic cation transportInterproscan
GO:0006874
all species →		Biological Processintracellular calcium ion homeostasisInterproscan
GO:0008324
all species →		Molecular Functionmonoatomic cation transmembrane transporter activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap3.2263.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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