Genomic Location: Ap3:27252550...27266121
NR annotation: XP_020623413.1, acetyl-coenzyme A synthetase, cytoplasmic-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap3.2515 |
| Transcript |
| evm.model.Ap3.2515 |
| Protein |
| evm.model.Ap3.2515 |
| UniProt accession | Description |
|---|---|
| Q9QXG4 | Acetyl-coenzyme A synthetase, cytoplasmic OS=Mus musculus OX=10090 GN=Acss2 PE=1 SV=2 |
| Q9NR19 | Acetyl-coenzyme A synthetase, cytoplasmic OS=Homo sapiens OX=9606 GN=ACSS2 PE=1 SV=1 |
| Q9VP61 | Acetyl-coenzyme A synthetase OS=Drosophila melanogaster OX=7227 GN=AcCoAS PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000999 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00501 all species → | AMP-binding | AMP-binding enzyme | Family | Interproscan |
| PF13193 all species → | AMP-binding_C | AMP-binding enzyme C-terminal domain | Domain | Interproscan |
| PF16177 all species → | ACAS_N | Acetyl-coenzyme A synthetase N-terminus | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR042099 all species → | Homologous_superfamily | ANL, N-terminal domain | Interproscan |
| IPR000873 all species → | Domain | AMP-dependent synthetase/ligase domain | Interproscan |
| IPR020845 all species → | Conserved_site | AMP-binding, conserved site | Interproscan |
| IPR025110 all species → | Domain | AMP-binding enzyme, C-terminal domain | Interproscan |
| IPR045851 all species → | Homologous_superfamily | AMP-binding enzyme, C-terminal domain superfamily | Interproscan |
| IPR032387 all species → | Domain | Acetyl-coenzyme A synthetase, N-terminal domain | Interproscan |
| IPR011904 all species → | Family | Acetate-CoA ligase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24095 all species → | ACETYL-COENZYME A SYNTHETASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003987 all species → | Molecular Function | acetate-CoA ligase activity | Interproscan |
| GO:0016208 all species → | Molecular Function | AMP binding | Interproscan |
| GO:0019427 all species → | Biological Process | acetyl-CoA biosynthetic process from acetate | Interproscan |
| GO:0006085 all species → | Biological Process | acetyl-CoA biosynthetic process | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K01895 | ACSS1_2, acs; acetyl-CoA synthetase | EC:6.2.1.1 | Lipid biosynthesis proteins | ko01004 | deepkoala |
Transcript abundance of evm.model.Ap3.2515 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
