Detailed information of evm.model.Ap3.285 in Astrangia poculata

Genomic Location: Ap3:2761518...2769057
NR annotation: CAH3109373.1, unnamed protein product [Pocillopora meandrina]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P36516Large ribosomal subunit protein mL44 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=MRPL3 PE=1 SV=2
Q49X17Ribonuclease 3 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41) OX=342451 GN=rnc PE=3 SV=1
A7X1J9Ribonuclease 3 OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) OX=418127 GN=rnc PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007971 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14622
all species →		Ribonucleas_3_3Ribonuclease-III-likeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000999
all species →		DomainRibonuclease III domainInterproscan
IPR036389
all species →		Homologous_superfamilyRibonuclease III, endonuclease domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11207
all species →		RIBONUCLEASE IIIInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004525
all species →		Molecular Functionribonuclease III activityInterproscan
GO:0006396
all species →		Biological ProcessRNA processingInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005762
all species →		Cellular Componentmitochondrial large ribosomal subunitInterproscan
GO:0070125
all species →		Biological Processmitochondrial translational elongationInterproscan
GO:0070877
all species →		Cellular Componentmicroprocessor complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap3.285.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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