Detailed information of evm.model.Ap3.329 in Astrangia poculata

Genomic Location: Ap3:3323920...3327947
NR annotation: KAJ7387043.1, RNA-binding protein pop5 [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9DB28Ribonuclease P/MRP protein subunit POP5 OS=Mus musculus OX=10090 GN=Pop5 PE=1 SV=1
Q1JQ92Ribonuclease P/MRP protein subunit POP5 OS=Bos taurus OX=9913 GN=POP5 PE=2 SV=1
Q969H6Ribonuclease P/MRP protein subunit POP5 OS=Homo sapiens OX=9606 GN=POP5 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008706 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01900
all species →		RNase_P_Rpp14Rpp14/Pop5 familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038085
all species →		Homologous_superfamilyRNase P subunit Pop5/Rpp14/Rnp2-like domain superfamilyInterproscan
IPR052312
all species →		FamilyEukaryotic/Archaeal RNase P Protein Component 2Interproscan
IPR002759
all species →		FamilyRNase P subunit Pop5/Rpp14/Rnp2-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48326
all species →		RIBONUCLEASE P_MRP PROTEIN SUBUNIT POP5Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0001682
all species →		Biological ProcesstRNA 5'-leader removalInterproscan
GO:0030677
all species →		Cellular Componentribonuclease P complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap3.329.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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