Gene detail

Detailed information of evm.model.Ap3.458.1.5f15e2bf in Astrangia poculata

Genomic Location: Ap3:4545495...4587859
NR annotation: XP_020629370.1, transmembrane 9 superfamily member 4-like isoform X2 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A5D7E2	Transmembrane 9 superfamily member 4 OS=Bos taurus OX=9913 GN=TM9SF4 PE=2 SV=2
Q92544	Transmembrane 9 superfamily member 4 OS=Homo sapiens OX=9606 GN=TM9SF4 PE=1 SV=2
Q5RDY2	Transmembrane 9 superfamily member 4 OS=Pongo abelii OX=9601 GN=TM9SF4 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000701 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02990 all species →	EMP70	Endomembrane protein 70	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004240 all species →	Family	Nonaspanin (TM9SF)	Interproscan
IPR036259 all species →	Homologous_superfamily	MFS transporter superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10766 all species →	TRANSMEMBRANE 9 SUPERFAMILY PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0072657 all species →	Biological Process	protein localization to membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17086	TM9SF2_4; transmembrane 9 superfamily member 2/4	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.