Detailed information of evm.model.Ap3.464 in Astrangia poculata

Genomic Location: Ap3:4692919...4702228
NR annotation: CAH3120250.1, unnamed protein product [Porites lobata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3ZBT5Syntaxin-7 OS=Bos taurus OX=9913 GN=STX7 PE=2 SV=1
O15400Syntaxin-7 OS=Homo sapiens OX=9606 GN=STX7 PE=1 SV=4
Q5R602Syntaxin-7 OS=Pongo abelii OX=9601 GN=STX7 PE=2 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001710 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05739
all species →		SNARESNARE domainFamilyInterproscan
PF14523
all species →		Syntaxin_2Syntaxin-like proteinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006012
all species →		Conserved_siteSyntaxin/epimorphin, conserved siteInterproscan
IPR000727
all species →		DomainTarget SNARE coiled-coil homology domainInterproscan
IPR006011
all species →		DomainSyntaxin, N-terminal domainInterproscan
IPR010989
all species →		Homologous_superfamilySNAREInterproscan
IPR045242
all species →		FamilySyntaxinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19957
all species →		SYNTAXINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005484
all species →		Molecular FunctionSNAP receptor activityInterproscan
GO:0006886
all species →		Biological Processintracellular protein transportInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0016192
all species →		Biological Processvesicle-mediated transportInterproscan
GO:0000149
all species →		Molecular FunctionSNARE bindingInterproscan
GO:0006906
all species →		Biological Processvesicle fusionInterproscan
GO:0012505
all species →		Cellular Componentendomembrane systemInterproscan
GO:0016021
all species →		Cellular ComponentmembraneInterproscan
GO:0031201
all species →		Cellular ComponentSNARE complexInterproscan
GO:0048278
all species →		Biological Processvesicle dockingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap3.464.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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