Detailed information of evm.model.Ap3.47 in Astrangia poculata

Genomic Location: Ap3:515294...517316
NR annotation: XP_020619310.1, meiotic nuclear division protein 1 homolog [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5XGY9Meiotic nuclear division protein 1 homolog OS=Xenopus laevis OX=8355 GN=mnd1 PE=2 SV=1
Q8K396Meiotic nuclear division protein 1 homolog OS=Mus musculus OX=10090 GN=Mnd1 PE=1 SV=1
Q32L19Meiotic nuclear division protein 1 homolog OS=Bos taurus OX=9913 GN=MND1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007065 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18517
all species →		LZ3wCHLeucine zipper with capping helix domainDomainInterproscan
PF03962
all species →		Mnd1Mnd1 HTH domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040661
all species →		DomainLeucine zipper with capping helix domainInterproscan
IPR005647
all species →		FamilyMeiotic nuclear division protein 1Interproscan
IPR040453
all species →		DomainMnd1, HTH domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31398
all species →		MEIOTIC NUCLEAR DIVISION PROTEIN 1 HOMOLOGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0007131
all species →		Biological Processreciprocal meiotic recombinationInterproscan
GO:0003690
all species →		Molecular Functiondouble-stranded DNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap3.47.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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