Detailed information of evm.model.Ap3.472 in Astrangia poculata

Genomic Location: Ap3:4777877...4783410
NR annotation: XP_020629716.1, serine/threonine-protein phosphatase PGAM5, mitochondrial-like isoform X1 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q502L2Serine/threonine-protein phosphatase PGAM5, mitochondrial OS=Danio rerio OX=7955 GN=pgam5 PE=2 SV=2
Q8BX10Serine/threonine-protein phosphatase PGAM5, mitochondrial OS=Mus musculus OX=10090 GN=Pgam5 PE=1 SV=1
Q96HS1Serine/threonine-protein phosphatase PGAM5, mitochondrial OS=Homo sapiens OX=9606 GN=PGAM5 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005102 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00300
all species →		His_Phos_1Histidine phosphatase superfamily (branch 1)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051021
all species →		FamilyMitochondrial serine/threonine phosphataseInterproscan
IPR029033
all species →		Homologous_superfamilyHistidine phosphatase superfamilyInterproscan
IPR013078
all species →		FamilyHistidine phosphatase superfamily, clade-1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20935
all species →		PHOSPHOGLYCERATE MUTASE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004722
all species →		Molecular Functionprotein serine/threonine phosphatase activityInterproscan
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0035970
all species →		Biological Processpeptidyl-threonine dephosphorylationInterproscan
GO:0090141
all species →		Biological Processpositive regulation of mitochondrial fissionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K15637PGAM5; serine/threonine-protein phosphatase PGAM5EC:3.1.3.16
Necroptosisko04217deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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