Detailed information of evm.model.Ap3.55 in Astrangia poculata

Genomic Location: Ap3:576543...583808
NR annotation: XP_020618342.1, leucine-rich repeat-containing protein 43-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8N309Leucine-rich repeat-containing protein 43 OS=Homo sapiens OX=9606 GN=LRRC43 PE=1 SV=2
Q95JT3Leucine-rich repeat-containing protein 43 OS=Macaca fascicularis OX=9541 GN=LRRC43 PE=2 SV=1
Q3V0L5Leucine-rich repeat-containing protein 43 OS=Mus musculus OX=10090 GN=Lrrc43 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008029 (this species only)

 Pfam domain
No Pfam domain signature was detected for evm.model.Ap3.55. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR050576
all species →		FamilyCiliary and flagellar integrity-associated proteinInterproscan
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45973
all species →		PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap3.55.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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