Genomic Location: Ap3:668685...671546
NR annotation: CAH3103764.1, unnamed protein product [Porites lobata]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap3.68 |
| Transcript |
| evm.model.Ap3.68 |
| Protein |
| evm.model.Ap3.68 |
| UniProt accession | Description |
|---|---|
| Q3MHR3 | Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1 |
| Q96FJ2 | Dynein light chain 2, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL2 PE=1 SV=1 |
| Q9D0M5 | Dynein light chain 2, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll2 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0002757 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01221 all species → | Dynein_light | Dynein light chain type 1 | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR019763 all species → | Conserved_site | Dynein light chain, type 1/2, conserved site | Interproscan |
| IPR037177 all species → | Homologous_superfamily | Dynein light chain superfamily | Interproscan |
| IPR001372 all species → | Family | Dynein light chain, type 1/2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11886 all species → | DYNEIN LIGHT CHAIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005875 all species → | Cellular Component | microtubule associated complex | Interproscan |
| GO:0007017 all species → | Biological Process | microtubule-based process | Interproscan |
| GO:0030286 all species → | Cellular Component | dynein complex | Interproscan |
| GO:0005868 all species → | Cellular Component | cytoplasmic dynein complex | Interproscan |
| GO:0045505 all species → | Molecular Function | dynein intermediate chain binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K10418 | DYNLL; dynein light chain LC8-type | - | Cytoskeleton proteins | ko04812 | deepkoala |
Transcript abundance of evm.model.Ap3.68 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
