Gene detail

Detailed information of evm.model.Ap3.805 in Astrangia poculata

Genomic Location: Ap3:8700528...8702795
NR annotation: KAJ7386826.1, hypothetical protein OS493_006856 [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap3.805

atgggaggtttgttctcaaggaagaaaaccagagacaatgaccatgcatcagagaggggaaacctcacaagagtcgatgtctattcatcgttttctgaaagctatgttttcgttaatagtgaaagaaacgcaccaaacagaagctatccaacaggaagctggagctcaacaccttcgcggccatcgacggaaggatattccgtcggtgagagcaaagcgaaacgctatgctgctgatagtgtcatcaaaacaacaccaaacaaaaggtgtggcgatgttgagtcaacgccaacatcatgtaaaggctgtgaatcagttgctgtcaagttgacgtcaaatgaaggttattctgcccccgctgtcaggagttctaccacttgcagcgtcaaacctgtgatacagaaaagccatgtttctgatcagtgcaggtcggcatcaatcaatgtctctagggatggaagttgttcaactggtagctggaacacagtactttctcgcagctcaatcgctacaaatgatgtcaatcgggccttatctggtgttgctgaaattgaaggttctgtggctgataattccattaattcagcatttaataaaagctctgctaatggtactaaagtcaatttgaaatcaagtgaagctcttgttgctcctattgtcaggtctgcagtagaaaggagttatgcaggttgtggtgtcaaccctgtgttatccgaaaactatgaaaatgatatgtgcgaaacagcaatcaatgttcctagtaatggaagcaaaaaagcattaaaaaaaacacgcgtcattgtagattacgttgctgatggaggtagtagggttgtcatttcagtgccactaaacccatggcaagtgctcggtctctcttcatcgagggtgtctcatgcggacgtcaatgcagcttttaagatgaagataacccaaccggtgcgccagaaccgtgcaatgatatccatagcctaccatatgctcacgtcatcggctggcaggtacaagcgaatacacggtacggacgaatttgtcgtgggaaagcgtgaccatttcatgctcgcagtatgtggccacacagaagagcttgcacttatgattgctaagagggaaaatcttgtagaagatagagacgaacaaagacggacactgctgtacattgcaagtaggtcaggcttctatgacacgtgcaagttactcctgcaaaaaggcgcgtctgtcaatgaaactcaaagagatggtagcacgcctcttcatggtgccgcatatttcggacatggattggtcgctggacttcttcttcaatatggggcgagaagtgacgtcaaaaataagtggggaactgccctggaagaaagcgccacgcccaagataaggaacctgatccaaactgcgtcagctgactacatttcgtcacttgctgcaaagctgaaagaaaagcaacttgtgtcgggtgtacgacttattgagtactttgggaaagtcatagcgaaggaacttactcgtgatccttgcacccttgatgtacacacacgagcagagtggaatagtattcaaaatgcctgggaaacagcatggcatggcactcgttataaatatttgcactcaataatagagaagggtcttctccccgctggttcaagtggtatcacgccagcagcgggccactacagtctcggtgaagtgcattttggcattcctaactgggcagcagcaattttcgtctccccaagcattctttatgcagcacatgcctgctattcggatcgagtcttctccgaatcccagcagtggtgcgtcctggtcaaggtctactgtaaacctggcagctataagtcatatgaccccaccgttttccagtacaagccgatggatggtgaacctaacatgccagagtatcgtgtgcctgtcaccgaagcggacaagaatgtcattatgcgcgtcgagtctacccgcagcgttgttgtccaatccctgatgttcgttcgtctcagctttcttgaaaatcaggacattaattttgagaaagcaatgacactcttgcgctaa

Transcript

evm.model.Ap3.805

ATGGGAGGTTTGTTCTCAAGGAAGAAAACCAGAGACAATGACCATGCATCAGAGAGGGGAAACCTCACAAGAGTCGATGTCTATTCATCGTTTTCTGAAAGCTATGTTTTCGTTAATAGTGAAAGAAACGCACCAAACAGAAGCTATCCAACAGGAAGCTGGAGCTCAACACCTTCGCGGCCATCGACGGAAGGATATTCCGTCGGTGAGAGCAAAGCGAAACGCTATGCTGCTGATAGTGTCATCAAAACAACACCAAACAAAAGGTGTGGCGATGTTGAGTCAACGCCAACATCATGTAAAGGCTGTGAATCAGTTGCTGTCAAGTTGACGTCAAATGAAGGTTATTCTGCCCCCGCTGTCAGGAGTTCTACCACTTGCAGCGTCAAACCTGTGATACAGAAAAGCCATGTTTCTGATCAGTGCAGGTCGGCATCAATCAATGTCTCTAGGGATGGAAGTTGTTCAACTGGTAGCTGGAACACAGTACTTTCTCGCAGCTCAATCGCTACAAATGATGTCAATCGGGCCTTATCTGGTGTTGCTGAAATTGAAGGTTCTGTGGCTGATAATTCCATTAATTCAGCATTTAATAAAAGCTCTGCTAATGGTACTAAAGTCAATTTGAAATCAAGTGAAGCTCTTGTTGCTCCTATTGTCAGGTCTGCAGTAGAAAGGAGTTATGCAGGTTGTGGTGTCAACCCTGTGTTATCCGAAAACTATGAAAATGATATGTGCGAAACAGCAATCAATGTTCCTAGTAATGGAAGCAAAAAAGCATTAAAAAAAACACGCGTCATTGTAGATTACGTTGCTGATGGAGGTAGTAGGGTTGTCATTTCAGTGCCACTAAACCCATGGCAAGTGCTCGGTCTCTCTTCATCGAGGGTGTCTCATGCGGACGTCAATGCAGCTTTTAAGATGAAGATAACCCAACCGGTGCGCCAGAACCGTGCAATGATATCCATAGCCTACCATATGCTCACGTCATCGGCTGGCAGGTACAAGCGAATACACGGTACGGACGAATTTGTCGTGGGAAAGCGTGACCATTTCATGCTCGCAGTATGTGGCCACACAGAAGAGCTTGCACTTATGATTGCTAAGAGGGAAAATCTTGTAGAAGATAGAGACGAACAAAGACGGACACTGCTGTACATTGCAAGTAGGTCAGGCTTCTATGACACGTGCAAGTTACTCCTGCAAAAAGGCGCGTCTGTCAATGAAACTCAAAGAGATGGTAGCACGCCTCTTCATGGTGCCGCATATTTCGGACATGGATTGGTCGCTGGACTTCTTCTTCAATATGGGGCGAGAAGTGACGTCAAAAATAAGTGGGGAACTGCCCTGGAAGAAAGCGCCACGCCCAAGATAAGGAACCTGATCCAAACTGCGTCAGCTGACTACATTTCGTCACTTGCTGCAAAGCTGAAAGAAAAGCAACTTGTGTCGGGTGTACGACTTATTGAGTACTTTGGGAAAGTCATAGCGAAGGAACTTACTCGTGATCCTTGCACCCTTGATGTACACACACGAGCAGAGTGGAATAGTATTCAAAATGCCTGGGAAACAGCATGGCATGGCACTCGTTATAAATATTTGCACTCAATAATAGAGAAGGGTCTTCTCCCCGCTGGTTCAAGTGGTATCACGCCAGCAGCGGGCCACTACAGTCTCGGTGAAGTGCATTTTGGCATTCCTAACTGGGCAGCAGCAATTTTCGTCTCCCCAAGCATTCTTTATGCAGCACATGCCTGCTATTCGGATCGAGTCTTCTCCGAATCCCAGCAGTGGTGCGTCCTGGTCAAGGTCTACTGTAAACCTGGCAGCTATAAGTCATATGACCCCACCGTTTTCCAGTACAAGCCGATGGATGGTGAACCTAACATGCCAGAGTATCGTGTGCCTGTCACCGAAGCGGACAAGAATGTCATTATGCGCGTCGAGTCTACCCGCAGCGTTGTTGTCCAATCCCTGATGTTCGTTCGTCTCAGCTTTCTTGAAAATCAGGACATTAATTTTGAGAAAGCAATGACACTCTTGCGCTAACAATGGACTTCCATATCTGCTAGATAGCTGTAAATCACAGATATCTAATCGAGAGCGTTCGTCCCATTTCCTCCCACACAGATTGCTTGAAGGTTTGTTCCAAATTTTGCTGTTTATACTCACGAGGATAGCTGAGCGTACTTCTGTACGTGCTGAAGGTCGATAGTGTCCGCTGTTGATTAGATACTTCCAAAGCTTTGTACGCTGAACATAGAACAT

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009792 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24171 all species →	ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for evm.model.Ap3.805.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.