Detailed information of evm.model.Ap4.1072 in Astrangia poculata

Genomic Location: Ap4:11176684...11177861
NR annotation: XP_020621713.1, solute carrier family 15 member 4-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q68F72Solute carrier family 15 member 4 OS=Xenopus laevis OX=8355 GN=slc15a4 PE=2 SV=1
A6QQL0Solute carrier family 15 member 4 OS=Bos taurus OX=9913 GN=SLC15A4 PE=2 SV=2
Q8N697Solute carrier family 15 member 4 OS=Homo sapiens OX=9606 GN=SLC15A4 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000490 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00854
all species →		PTR2POT familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036259
all species →		Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR000109
all species →		FamilyProton-dependent oligopeptide transporter familyInterproscan
IPR018456
all species →		Conserved_sitePTR2 family proton/oligopeptide symporter, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11654
all species →		OLIGOPEPTIDE TRANSPORTER-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0022857
all species →		Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085
all species →		Biological Processtransmembrane transportInterproscan
GO:0006857
all species →		Biological Processoligopeptide transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.1072.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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