Detailed information of evm.model.Ap4.1080 in Astrangia poculata

Genomic Location: Ap4:11241140...11257208
NR annotation: KAJ7372477.1, hypothetical protein OS493_018984 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001058 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00560
all species →		LRR_1Leucine Rich RepeatRepeatInterproscan
PF13855
all species →		LRR_8Leucine rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR050333
all species →		FamilySmall Leucine-Rich ProteoglycansInterproscan
IPR003591
all species →		RepeatLeucine-rich repeat, typical subtypeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45712
all species →		AGAP008170-PAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.1080.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP