Gene detail

Detailed information of evm.model.Ap4.1081 in Astrangia poculata

Genomic Location: Ap4:11261609...11302740
NR annotation: XP_027047796.1, uncharacterized protein LOC113675423 [Pocillopora damicornis]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap4.1081

atgactgataagcggagtcaaatccaagggaaatggaaggattttggaggcaacaggatctcttccattgagtctggagcctttcaaaatgtacaagggtctggttgcacaattgagctgtttggactggagttaacaaacatagcctctgaagcattcaaagacgtgacagttacatgggattttgaactgtataacagcaaaattgctacttttgaagaaaacccttttctatcagtcacagtgaccaatggagccctggaacttcaggacaatgtcatccaggcagtgacaggaaagctgtttggtgactctggatcaacagtaaagacactggacctttccaataaccaaatacaatccttacatgacgatgctttaaaaggtgtatcaattactgaagcaatcaaacttatgaacaacaagctggttacatttccttcggaaactcttaaaaatcaaaatcccattgaacttgacatgtccaataataacattcctaccattacacctggagagttagacacatttactaatcttcagaagctagacctcagagagaataacattggtgttgttcaaacaggagcatttaatagcttatggagcgtcgaggaaatttatttgcaggataatcagattgttttcctgcccagatttcctgcactacaaaatctaaagattcttaatcttaggaacaacaagatagaaaacattggtcaagcctgttttacaaatcttacaagccttgagaatctgaacttcaaagacaacaaccttgcatgtgattgcaatgtgtacagctcccttgttgctgttatcgaagcgctttctgcagggagggctgcagtgtgcatttcaccaccacgagttgctggtgtggagttttatccaagtggatcttacgagagagggaggaaaaccggagaacccggagaaaaaccctcggagcaaggcgagaaccaacaacaaactcaacccacatatggcactgggccggaatcgaacccgggccacattgcacctgtcaatatatctgcatcagcccctggtgactttcagctgcgagtggactgggacagacctgcagcgctttatccaccttatgtagtggactcgaacaccaccattgtggatacatggactataacagatgtcataagtgtgaactacagtgcgacatgtgacagtgcagatgcagcctcactcttcggcacaagccaaagcgagtttttcctgtttaaacaggctgacggtgtcaaagctggtattgactatgtatgccatgtgaccatgacagtaacagcctataatggcacaaacttacctagtgatgaacttggattcattgaaacacaaacaagccccaaaagtgagaaaacaagtatcactacactggagggaaaggctcctgtgacaaatgtttcgcaaaacagctccaactactacttggacatcacctattacgatttccagttttccgatggtgattttactggtcttggtgcatggagaagtgacctttaccgagaccctcagtatgtacacagtccttttggcagctggttggcaatatcaaacagccccactggtgatagtttttctcagtggtttagaagtgattcggttagaaacatacattacgaggagaagttagagttggggatacaatcagagacagattttaatggcaatccagtgtttcgttattttaatgaccagtttttcccagttgatggccgtggatttggagcagaaggacagagggactgtttcactaatgctcttagaaattatggattcacggcagcagtacgcacaactttcaacttttctggcaacgaaatattgacattctctggcggcgaggagctgtgggtgtacattgacaagacacttgtgatgcagatattcactgatccatcagacaccgatattccttgtcgcactatcagtttagcaaacgctgcaagtaacggatctatagttcctgaaggtggttctgttgttggtggaaaatgccaagtgactggctcactgccagcagagacaataaacttatctcttaaggttaatgaaccataccgtttggatgtgtttattgctgagagattccgttgtacatcacacattttgttccagtcaagtggtgtgtcgtttctgttggatgatcctcggccgcttgactattttgctgtaataagtgagaatgcgtatattggctctattgtccagtcttttagcgtggcagacgcattctcggctgggccatatgatgtagacatccttgaaggaaatgcacaagacaggtttgaagtaaaagacggagtgtacacaacaccctctccccctgtcacaccagccccaaccaccttcatccttgatggagagacgattgtattgtgtccaaatgctactgatgacccagtggatccaatacccgatgtcaattcaggcattcagtcgttttctattggcacaactacagctgcccttacactcaaagctctactagattttgaatacaccacgtcttatctgttatacctgagaattactgatactgccaatgggtggactgggaatatcacaatcaagatcattgttgaagattacaacgatcattgtccgttcttgcaagaagtgaatataaacctggacttggagccaatcccgcccctccagagcgcagcgttcttcactgctgtagccactgacaaagacagcggtttgaatggtcagatcgaatacaaggccagtgacccagagagaatcccccatatcaatgccacaaagttctatgtccaaaatggcagtgaggtagtatggagtaataaaactgtcaaatggacatacaactactacatatttgctgtggatggtggctcgcctaagcgtggtgaccgcattcctctgagcatcacatttgatgtgacctgtgagacgacaggagctgttgtggctgatcgtaacactggagaggtgttctttagagctcctggactcacaggctctgaatatccattaaactcgactaccaaaccaaggtgtcgtggctgtacgactggattctactgtgttggtgatggaactgaaaaacgatgcggagtcgactcaccaactgaattttcatttggatccgctgcaagctgttcaccgtgtccagagggatggctctgtgtgaacggcaccgctcttccttgtccagacagtacctatgtcaaatgcaattcaacgtggtgtcccgagcagtgttttgactgcgagcctggcacagtatgctgggaagggatgaggcaagattgcacaccaggacgatacagtaatggaaaaggttttccttgtaagttgtgccctcctggaagcttcaacaacgagacccgtgcacagacgtgtgagtgttgccctgatggttacagcagtacatatatgaagacgagttgtcagccatgtcctaaaaacgagtgggcaaagcatgaaagcttcccgaactgttccttgtgccagacgtgctttacaccagaagactgtccatgcttatctaatgacacttgtttccctggcgtgagttgtcttaatgtcggagttggtgtggcaacgtgtggaccgtgccctaaaggatatgagggagatggaacaacatgtgatgacatcgatgagtgcgcccgtgccaatccctgctatgaaagcgacaagtgtgagaatcgtgtccctggctatcagtgtgccgcatgtccttacggctacagaggcaatgctccgtcaggtgttgggctggaagatgctcaaaacgcccaacaagtctgtgaggagatcgacgagtgtaaggagggaatcagcagttgtgatcctaattcacagtgtatcaacaccaacgggagtttcttatgcggcccatgtcaccctggattcatcggtgatggttacacaggctgtcaacctggtgacctgtgcaccaatggctcacatacgtgtcacgagaatgcacagtgcacccaaactggcgctggacgattcaaatgcaggtgtaaagacggttatggtggtgacggggaagagtgtgaaattgatcctgatcttgatggaatcccgtccgttcagttgagttgcactttgccaaactgctttaaggataactgtccaagtgtgcctaatacgggtcaagaggataacgataatgacacagtcggagacgcgtgtgatgaggatgatgataatgatttgattcttgataagtctgacaactgtcaattcgtgaaaaatctggatcaaacagacacggatggagacggagtaggtgatgcatgcgacaactgcgtgaacacaccaaaccctgatcagttggacagtgatggagacggcatgggtgatgcgtgtgacagtgaccccgacaacgatggtttggaagctactgataactgcccaacagtcagtaatcctgaccaagctgataccgatggtgaccttgacggagatgcttgtgataactgccctacagtttctaattcagatcaggcggacaccgatcaaagtttatatggtgatgcttgttccggggcagggaaagacaaggatggtgatggcgtacctgatggccttgacaactgtgttgatcttcctaatggtgaacaagcagatgctgatgacgataacataggagatgcttgtgatgatgatcaagacggtgatggtgtttctaaccttgatgacaattgccgtttggtcagcaacccgggtcaagaacacgacaacctggcttacgacgctaaagcacgaccagttggcgatgtgtgtgttgacgactttgatggcgatggtgtgaatgataatgatgaccactgtccatatgttaaacatctcagtaaaacaagctttactgatcacttcacagttgatctgtatccaggacacagtgatcaactgcccgtatggagagtcgctaaaagtggtattgacgttgaagaagtaaccaacggttcatctcaacacccttctatgcttattggcaaaactaggtatggtcctgtagactacactggaacactttatgtaaagggaagtgagagttcagactatgtaggcgtggtcttcggctatcaatcaaatcgcaagttctacgtggtgatgtggaggagagaaaacagcaacttccaagaacagaattatcgggcaggaattaaaggcgtgcagctaaagcttgtcgattccaactcgggacctgggttggctttagcacaagcactgtggcattctggggacaccagcaaccaggttaagctcctgtggcaggatcctaatatggagggatggaattatcagacttcttacgctttccacgtcacccatagaccttccatcggacttatcagagtacaagttaaacaaggcgaaacagtgttaactgagtcaggtgacgtgtatgaaacaacaatcactggaggtcgactcggtatgttggtgtttggacagcaggatgtaatctggtcaagacttgaggctagatgcgctgacagggcgaaccaagccttgcagtttgatggtgttgatgatcacgtattactgccgtctattcataatcttggtcttacagacagttttaccatcagtacatgggtttggatggcagcggattatcccaatgatgtcatgcctattgtatgcagtcttgacgcttcgttgtgtttatacttgaaggacagacaaatccatggaaacctggggtcatctgtggcacaaggatccgaagtcattgaacctgaggaatggcatcacttggtctacagatatgatgctcagacctacagccttgaactttttgttaatgggtcttctgttggagtgaagagcaacgttttgccacacacatgggctccaagtgaccttctttacgtgggacgcgacaatgataattacatgaatggaactgtggatgacttaaccctgtttggaatctacgttgaagacgcagagatcatcgactacatgaagaccgctggcctgttgttgcccatccacaagggcgtggtcagagcacatttcaacatggatgacactactggttcagtcattcgcgatcaagcgggtaatgattaccatggaaacctggttggtgggccaagccttgtctcgagctctgttgacaagaatcgatttgtgataactttcccaaacaacaggaggagaagaaggagccttagtgaagagtcatggccgcggcatagcgaactctaa

Transcript

evm.model.Ap4.1081

ATGACTGATAAGCGGAGTCAAATCCAAGGGAAATGGAAGGATTTTGGAGGCAACAGGATCTCTTCCATTGAGTCTGGAGCCTTTCAAAATGTACAAGGGTCTGGTTGCACAATTGAGCTGTTTGGACTGGAGTTAACAAACATAGCCTCTGAAGCATTCAAAGACGTGACAGTTACATGGGATTTTGAACTGTATAACAGCAAAATTGCTACTTTTGAAGAAAACCCTTTTCTATCAGTCACAGTGACCAATGGAGCCCTGGAACTTCAGGACAATGTCATCCAGGCAGTGACAGGAAAGCTGTTTGGTGACTCTGGATCAACAGTAAAGACACTGGACCTTTCCAATAACCAAATACAATCCTTACATGACGATGCTTTAAAAGGTGTATCAATTACTGAAGCAATCAAACTTATGAACAACAAGCTGGTTACATTTCCTTCGGAAACTCTTAAAAATCAAAATCCCATTGAACTTGACATGTCCAATAATAACATTCCTACCATTACACCTGGAGAGTTAGACACATTTACTAATCTTCAGAAGCTAGACCTCAGAGAGAATAACATTGGTGTTGTTCAAACAGGAGCATTTAATAGCTTATGGAGCGTCGAGGAAATTTATTTGCAGGATAATCAGATTGTTTTCCTGCCCAGATTTCCTGCACTACAAAATCTAAAGATTCTTAATCTTAGGAACAACAAGATAGAAAACATTGGTCAAGCCTGTTTTACAAATCTTACAAGCCTTGAGAATCTGAACTTCAAAGACAACAACCTTGCATGTGATTGCAATGTGTACAGCTCCCTTGTTGCTGTTATCGAAGCGCTTTCTGCAGGGAGGGCTGCAGTGTGCATTTCACCACCACGAGTTGCTGGTGTGGAGTTTTATCCAAGTGGATCTTACGAGAGAGGGAGGAAAACCGGAGAACCCGGAGAAAAACCCTCGGAGCAAGGCGAGAACCAACAACAAACTCAACCCACATATGGCACTGGGCCGGAATCGAACCCGGGCCACATTGCACCTGTCAATATATCTGCATCAGCCCCTGGTGACTTTCAGCTGCGAGTGGACTGGGACAGACCTGCAGCGCTTTATCCACCTTATGTAGTGGACTCGAACACCACCATTGTGGATACATGGACTATAACAGATGTCATAAGTGTGAACTACAGTGCGACATGTGACAGTGCAGATGCAGCCTCACTCTTCGGCACAAGCCAAAGCGAGTTTTTCCTGTTTAAACAGGCTGACGGTGTCAAAGCTGGTATTGACTATGTATGCCATGTGACCATGACAGTAACAGCCTATAATGGCACAAACTTACCTAGTGATGAACTTGGATTCATTGAAACACAAACAAGCCCCAAAAGTGAGAAAACAAGTATCACTACACTGGAGGGAAAGGCTCCTGTGACAAATGTTTCGCAAAACAGCTCCAACTACTACTTGGACATCACCTATTACGATTTCCAGTTTTCCGATGGTGATTTTACTGGTCTTGGTGCATGGAGAAGTGACCTTTACCGAGACCCTCAGTATGTACACAGTCCTTTTGGCAGCTGGTTGGCAATATCAAACAGCCCCACTGGTGATAGTTTTTCTCAGTGGTTTAGAAGTGATTCGGTTAGAAACATACATTACGAGGAGAAGTTAGAGTTGGGGATACAATCAGAGACAGATTTTAATGGCAATCCAGTGTTTCGTTATTTTAATGACCAGTTTTTCCCAGTTGATGGCCGTGGATTTGGAGCAGAAGGACAGAGGGACTGTTTCACTAATGCTCTTAGAAATTATGGATTCACGGCAGCAGTACGCACAACTTTCAACTTTTCTGGCAACGAAATATTGACATTCTCTGGCGGCGAGGAGCTGTGGGTGTACATTGACAAGACACTTGTGATGCAGATATTCACTGATCCATCAGACACCGATATTCCTTGTCGCACTATCAGTTTAGCAAACGCTGCAAGTAACGGATCTATAGTTCCTGAAGGTGGTTCTGTTGTTGGTGGAAAATGCCAAGTGACTGGCTCACTGCCAGCAGAGACAATAAACTTATCTCTTAAGGTTAATGAACCATACCGTTTGGATGTGTTTATTGCTGAGAGATTCCGTTGTACATCACACATTTTGTTCCAGTCAAGTGGTGTGTCGTTTCTGTTGGATGATCCTCGGCCGCTTGACTATTTTGCTGTAATAAGTGAGAATGCGTATATTGGCTCTATTGTCCAGTCTTTTAGCGTGGCAGACGCATTCTCGGCTGGGCCATATGATGTAGACATCCTTGAAGGAAATGCACAAGACAGGTTTGAAGTAAAAGACGGAGTGTACACAACACCCTCTCCCCCTGTCACACCAGCCCCAACCACCTTCATCCTTGATGGAGAGACGATTGTATTGTGTCCAAATGCTACTGATGACCCAGTGGATCCAATACCCGATGTCAATTCAGGCATTCAGTCGTTTTCTATTGGCACAACTACAGCTGCCCTTACACTCAAAGCTCTACTAGATTTTGAATACACCACGTCTTATCTGTTATACCTGAGAATTACTGATACTGCCAATGGGTGGACTGGGAATATCACAATCAAGATCATTGTTGAAGATTACAACGATCATTGTCCGTTCTTGCAAGAAGTGAATATAAACCTGGACTTGGAGCCAATCCCGCCCCTCCAGAGCGCAGCGTTCTTCACTGCTGTAGCCACTGACAAAGACAGCGGTTTGAATGGTCAGATCGAATACAAGGCCAGTGACCCAGAGAGAATCCCCCATATCAATGCCACAAAGTTCTATGTCCAAAATGGCAGTGAGGTAGTATGGAGTAATAAAACTGTCAAATGGACATACAACTACTACATATTTGCTGTGGATGGTGGCTCGCCTAAGCGTGGTGACCGCATTCCTCTGAGCATCACATTTGATGTGACCTGTGAGACGACAGGAGCTGTTGTGGCTGATCGTAACACTGGAGAGGTGTTCTTTAGAGCTCCTGGACTCACAGGCTCTGAATATCCATTAAACTCGACTACCAAACCAAGGTGTCGTGGCTGTACGACTGGATTCTACTGTGTTGGTGATGGAACTGAAAAACGATGCGGAGTCGACTCACCAACTGAATTTTCATTTGGATCCGCTGCAAGCTGTTCACCGTGTCCAGAGGGATGGCTCTGTGTGAACGGCACCGCTCTTCCTTGTCCAGACAGTACCTATGTCAAATGCAATTCAACGTGGTGTCCCGAGCAGTGTTTTGACTGCGAGCCTGGCACAGTATGCTGGGAAGGGATGAGGCAAGATTGCACACCAGGACGATACAGTAATGGAAAAGGTTTTCCTTGTAAGTTGTGCCCTCCTGGAAGCTTCAACAACGAGACCCGTGCACAGACGTGTGAGTGTTGCCCTGATGGTTACAGCAGTACATATATGAAGACGAGTTGTCAGCCATGTCCTAAAAACGAGTGGGCAAAGCATGAAAGCTTCCCGAACTGTTCCTTGTGCCAGACGTGCTTTACACCAGAAGACTGTCCATGCTTATCTAATGACACTTGTTTCCCTGGCGTGAGTTGTCTTAATGTCGGAGTTGGTGTGGCAACGTGTGGACCGTGCCCTAAAGGATATGAGGGAGATGGAACAACATGTGATGACATCGATGAGTGCGCCCGTGCCAATCCCTGCTATGAAAGCGACAAGTGTGAGAATCGTGTCCCTGGCTATCAGTGTGCCGCATGTCCTTACGGCTACAGAGGCAATGCTCCGTCAGGTGTTGGGCTGGAAGATGCTCAAAACGCCCAACAAGTCTGTGAGGAGATCGACGAGTGTAAGGAGGGAATCAGCAGTTGTGATCCTAATTCACAGTGTATCAACACCAACGGGAGTTTCTTATGCGGCCCATGTCACCCTGGATTCATCGGTGATGGTTACACAGGCTGTCAACCTGGTGACCTGTGCACCAATGGCTCACATACGTGTCACGAGAATGCACAGTGCACCCAAACTGGCGCTGGACGATTCAAATGCAGGTGTAAAGACGGTTATGGTGGTGACGGGGAAGAGTGTGAAATTGATCCTGATCTTGATGGAATCCCGTCCGTTCAGTTGAGTTGCACTTTGCCAAACTGCTTTAAGGATAACTGTCCAAGTGTGCCTAATACGGGTCAAGAGGATAACGATAATGACACAGTCGGAGACGCGTGTGATGAGGATGATGATAATGATTTGATTCTTGATAAGTCTGACAACTGTCAATTCGTGAAAAATCTGGATCAAACAGACACGGATGGAGACGGAGTAGGTGATGCATGCGACAACTGCGTGAACACACCAAACCCTGATCAGTTGGACAGTGATGGAGACGGCATGGGTGATGCGTGTGACAGTGACCCCGACAACGATGGTTTGGAAGCTACTGATAACTGCCCAACAGTCAGTAATCCTGACCAAGCTGATACCGATGGTGACCTTGACGGAGATGCTTGTGATAACTGCCCTACAGTTTCTAATTCAGATCAGGCGGACACCGATCAAAGTTTATATGGTGATGCTTGTTCCGGGGCAGGGAAAGACAAGGATGGTGATGGCGTACCTGATGGCCTTGACAACTGTGTTGATCTTCCTAATGGTGAACAAGCAGATGCTGATGACGATAACATAGGAGATGCTTGTGATGATGATCAAGACGGTGATGGTGTTTCTAACCTTGATGACAATTGCCGTTTGGTCAGCAACCCGGGTCAAGAACACGACAACCTGGCTTACGACGCTAAAGCACGACCAGTTGGCGATGTGTGTGTTGACGACTTTGATGGCGATGGTGTGAATGATAATGATGACCACTGTCCATATGTTAAACATCTCAGTAAAACAAGCTTTACTGATCACTTCACAGTTGATCTGTATCCAGGACACAGTGATCAACTGCCCGTATGGAGAGTCGCTAAAAGTGGTATTGACGTTGAAGAAGTAACCAACGGTTCATCTCAACACCCTTCTATGCTTATTGGCAAAACTAGGTATGGTCCTGTAGACTACACTGGAACACTTTATGTAAAGGGAAGTGAGAGTTCAGACTATGTAGGCGTGGTCTTCGGCTATCAATCAAATCGCAAGTTCTACGTGGTGATGTGGAGGAGAGAAAACAGCAACTTCCAAGAACAGAATTATCGGGCAGGAATTAAAGGCGTGCAGCTAAAGCTTGTCGATTCCAACTCGGGACCTGGGTTGGCTTTAGCACAAGCACTGTGGCATTCTGGGGACACCAGCAACCAGGTTAAGCTCCTGTGGCAGGATCCTAATATGGAGGGATGGAATTATCAGACTTCTTACGCTTTCCACGTCACCCATAGACCTTCCATCGGACTTATCAGAGTACAAGTTAAACAAGGCGAAACAGTGTTAACTGAGTCAGGTGACGTGTATGAAACAACAATCACTGGAGGTCGACTCGGTATGTTGGTGTTTGGACAGCAGGATGTAATCTGGTCAAGACTTGAGGCTAGATGCGCTGACAGGGCGAACCAAGCCTTGCAGTTTGATGGTGTTGATGATCACGTATTACTGCCGTCTATTCATAATCTTGGTCTTACAGACAGTTTTACCATCAGTACATGGGTTTGGATGGCAGCGGATTATCCCAATGATGTCATGCCTATTGTATGCAGTCTTGACGCTTCGTTGTGTTTATACTTGAAGGACAGACAAATCCATGGAAACCTGGGGTCATCTGTGGCACAAGGATCCGAAGTCATTGAACCTGAGGAATGGCATCACTTGGTCTACAGATATGATGCTCAGACCTACAGCCTTGAACTTTTTGTTAATGGGTCTTCTGTTGGAGTGAAGAGCAACGTTTTGCCACACACATGGGCTCCAAGTGACCTTCTTTACGTGGGACGCGACAATGATAATTACATGAATGGAACTGTGGATGACTTAACCCTGTTTGGAATCTACGTTGAAGACGCAGAGATCATCGACTACATGAAGACCGCTGGCCTGTTGTTGCCCATCCACAAGGGCGTGGTCAGAGCACATTTCAACATGGATGACACTACTGGTTCAGTCATTCGCGATCAAGCGGGTAATGATTACCATGGAAACCTGGTTGGTGGGCCAAGCCTTGTCTCGAGCTCTGTTGACAAGAATCGATTTGTGATAACTTTCCCAAACAACAGGAGGAGAAGAAGGAGCCTTAGTGAAGAGTCATGGCCGCGGCATAGCGAACTCTAA

Protein

evm.model.Ap4.1081

MTDKRSQIQGKWKDFGGNRISSIESGAFQNVQGSGCTIELFGLELTNIASEAFKDVTVTWDFELYNSKIATFEENPFLSVTVTNGALELQDNVIQAVTGKLFGDSGSTVKTLDLSNNQIQSLHDDALKGVSITEAIKLMNNKLVTFPSETLKNQNPIELDMSNNNIPTITPGELDTFTNLQKLDLRENNIGVVQTGAFNSLWSVEEIYLQDNQIVFLPRFPALQNLKILNLRNNKIENIGQACFTNLTSLENLNFKDNNLACDCNVYSSLVAVIEALSAGRAAVCISPPRVAGVEFYPSGSYERGRKTGEPGEKPSEQGENQQQTQPTYGTGPESNPGHIAPVNISASAPGDFQLRVDWDRPAALYPPYVVDSNTTIVDTWTITDVISVNYSATCDSADAASLFGTSQSEFFLFKQADGVKAGIDYVCHVTMTVTAYNGTNLPSDELGFIETQTSPKSEKTSITTLEGKAPVTNVSQNSSNYYLDITYYDFQFSDGDFTGLGAWRSDLYRDPQYVHSPFGSWLAISNSPTGDSFSQWFRSDSVRNIHYEEKLELGIQSETDFNGNPVFRYFNDQFFPVDGRGFGAEGQRDCFTNALRNYGFTAAVRTTFNFSGNEILTFSGGEELWVYIDKTLVMQIFTDPSDTDIPCRTISLANAASNGSIVPEGGSVVGGKCQVTGSLPAETINLSLKVNEPYRLDVFIAERFRCTSHILFQSSGVSFLLDDPRPLDYFAVISENAYIGSIVQSFSVADAFSAGPYDVDILEGNAQDRFEVKDGVYTTPSPPVTPAPTTFILDGETIVLCPNATDDPVDPIPDVNSGIQSFSIGTTTAALTLKALLDFEYTTSYLLYLRITDTANGWTGNITIKIIVEDYNDHCPFLQEVNINLDLEPIPPLQSAAFFTAVATDKDSGLNGQIEYKASDPERIPHINATKFYVQNGSEVVWSNKTVKWTYNYYIFAVDGGSPKRGDRIPLSITFDVTCETTGAVVADRNTGEVFFRAPGLTGSEYPLNSTTKPRCRGCTTGFYCVGDGTEKRCGVDSPTEFSFGSAASCSPCPEGWLCVNGTALPCPDSTYVKCNSTWCPEQCFDCEPGTVCWEGMRQDCTPGRYSNGKGFPCKLCPPGSFNNETRAQTCECCPDGYSSTYMKTSCQPCPKNEWAKHESFPNCSLCQTCFTPEDCPCLSNDTCFPGVSCLNVGVGVATCGPCPKGYEGDGTTCDDIDECARANPCYESDKCENRVPGYQCAACPYGYRGNAPSGVGLEDAQNAQQVCEEIDECKEGISSCDPNSQCINTNGSFLCGPCHPGFIGDGYTGCQPGDLCTNGSHTCHENAQCTQTGAGRFKCRCKDGYGGDGEECEIDPDLDGIPSVQLSCTLPNCFKDNCPSVPNTGQEDNDNDTVGDACDEDDDNDLILDKSDNCQFVKNLDQTDTDGDGVGDACDNCVNTPNPDQLDSDGDGMGDACDSDPDNDGLEATDNCPTVSNPDQADTDGDLDGDACDNCPTVSNSDQADTDQSLYGDACSGAGKDKDGDGVPDGLDNCVDLPNGEQADADDDNIGDACDDDQDGDGVSNLDDNCRLVSNPGQEHDNLAYDAKARPVGDVCVDDFDGDGVNDNDDHCPYVKHLSKTSFTDHFTVDLYPGHSDQLPVWRVAKSGIDVEEVTNGSSQHPSMLIGKTRYGPVDYTGTLYVKGSESSDYVGVVFGYQSNRKFYVVMWRRENSNFQEQNYRAGIKGVQLKLVDSNSGPGLALAQALWHSGDTSNQVKLLWQDPNMEGWNYQTSYAFHVTHRPSIGLIRVQVKQGETVLTESGDVYETTITGGRLGMLVFGQQDVIWSRLEARCADRANQALQFDGVDDHVLLPSIHNLGLTDSFTISTWVWMAADYPNDVMPIVCSLDASLCLYLKDRQIHGNLGSSVAQGSEVIEPEEWHHLVYRYDAQTYSLELFVNGSSVGVKSNVLPHTWAPSDLLYVGRDNDNYMNGTVDDLTLFGIYVEDAEIIDYMKTAGLLLPIHKGVVRAHFNMDDTTGSVIRDQAGNDYHGNLVGGPSLVSSSVDKNRFVITFPNNRRRRRSLSEESWPRHSEL*

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P49746	Thrombospondin-3 OS=Homo sapiens OX=9606 GN=THBS3 PE=1 SV=1
Q8JHW2	Thrombospondin-3a OS=Danio rerio OX=7955 GN=thbs3a PE=2 SV=2
Q05895	Thrombospondin-3 OS=Mus musculus OX=10090 GN=Thbs3 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001058 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13385 all species →	Laminin_G_3	Concanavalin A-like lectin/glucanases superfamily	Domain	Interproscan
PF13306 all species →	LRR_5	BspA type Leucine rich repeat region (6 copies)	Repeat	Interproscan
PF05735 all species →	TSP_C	Thrombospondin C-terminal region	Family	Interproscan
PF12947 all species →	EGF_3	EGF domain	Domain	Interproscan
PF13855 all species →	LRR_8	Leucine rich repeat	Repeat	Interproscan
PF02412 all species →	TSP_3	Thrombospondin type 3 repeat	Domain	Interproscan
PF07645 all species →	EGF_CA	Calcium-binding EGF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR028974 all species →	Homologous_superfamily	TSP type-3 repeat	Interproscan
IPR013320 all species →	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR026906 all species →	Repeat	BspA-type LRR region	Interproscan
IPR008859 all species →	Domain	Thrombospondin, C-terminal	Interproscan
IPR024731 all species →	Domain	EGF domain	Interproscan
IPR002126 all species →	Domain	Cadherin-like	Interproscan
IPR015919 all species →	Homologous_superfamily	Cadherin-like superfamily	Interproscan
IPR017897 all species →	Repeat	Thrombospondin, type 3 repeat	Interproscan
IPR003367 all species →	Repeat	Thrombospondin, type 3-like repeat	Interproscan
IPR003591 all species →	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR049883 all species →	Domain	NOTCH1 EGF-like calcium-binding domain	Interproscan
IPR018097 all species →	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR001881 all species →	Domain	EGF-like calcium-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10199 all species →	THROMBOSPONDIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005576 all species →	Cellular Component	extracellular region	Interproscan
GO:0007155 all species →	Biological Process	cell adhesion	Interproscan
GO:0007156 all species →	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0062023 all species →	Cellular Component	collagen-containing extracellular matrix	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04659	THBS2S; thrombospondin 2/3/4/5	-	Glycosaminoglycan binding proteins	ko00536	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of evm.model.Ap4.1081 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

49Samples

0TPM > 0

4Conditions

0.0Max TPM

0.0Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM	Mean, relative to max
whole organism · cold control	14	0	0.00	0.00
whole organism · heat control	12	0	0.00	0.00
whole organism · cold challenge	12	0	0.00	0.00
whole organism · heat challenge	11	0	0.00	0.00

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study
SRR10674714	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674715	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674724	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674733	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674734	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674735	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674736	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674737	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674739	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674743	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674746	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674747	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674748	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674750	whole organism · cold control	whole organism	not recorded	cold control	SRP237293
SRR10674706	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674707	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674708	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674717	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674718	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674720	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674721	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674725	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674731	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674741	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674752	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674753	whole organism · heat control	whole organism	not recorded	heat control	SRP237293
SRR10674711	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674712	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674713	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674722	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674723	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674730	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674732	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674738	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674740	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674744	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674745	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674749	whole organism · cold challenge	whole organism	not recorded	cold challenge	SRP237293
SRR10674709	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674710	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674716	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674719	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674726	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674727	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674728	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674729	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674742	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674751	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293
SRR10674754	whole organism · heat challenge	whole organism	not recorded	heat challenge	SRP237293

Source: CnidoSite RNA-seq expression matrices (APOCU_TPM, StringTie quantification over 49 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.