Detailed information of evm.model.Ap4.1149 in Astrangia poculata

Genomic Location: Ap4:11943941...11946208
NR annotation: XP_020607908.1, LOW QUALITY PROTEIN: CWF19-like protein 1, partial [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5RGJ5CWF19-like protein 1 OS=Danio rerio OX=7955 GN=cwf19l1 PE=2 SV=1
Q8CI33CWF19-like protein 1 OS=Mus musculus OX=10090 GN=Cwf19l1 PE=1 SV=2
Q5R8R4CWF19-like protein 1 OS=Pongo abelii OX=9601 GN=CWF19L1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003765 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04676
all species →		CwfJ_C_2Protein similar to CwfJ C-terminus 2FamilyInterproscan
PF04677
all species →		CwfJ_C_1Protein similar to CwfJ C-terminus 1FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040194
all species →		FamilyCwf19-like proteinInterproscan
IPR006767
all species →		DomainCwf19-like protein, C-terminal domain-2Interproscan
IPR006768
all species →		DomainCwf19-like, C-terminal domain-1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12072
all species →		CWF19, CELL CYCLE CONTROL PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000398
all species →		Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0061632
all species →		Molecular FunctionRNA lariat debranching enzyme activator activityInterproscan
GO:0071014
all species →		Cellular Componentpost-mRNA release spliceosomal complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.1149.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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