Detailed information of evm.model.Ap4.1253 in Astrangia poculata

Genomic Location: Ap4:12921172...12924116
NR annotation: XP_020602206.1, uncharacterized protein LOC110041262 [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9VRJ0Flap endonuclease GEN OS=Drosophila melanogaster OX=7227 GN=Gen PE=1 SV=1
P0CS61Flap endonuclease 1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=FEN1 PE=3 SV=1
P0CS60Flap endonuclease 1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=FEN1 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002363 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00752
all species →		XPG_NXPG N-terminal domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006085
all species →		DomainXPG, N-terminalInterproscan
IPR006084
all species →		FamilyXPG/Rad2 endonucleaseInterproscan
IPR029060
all species →		Homologous_superfamilyPIN-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11081
all species →		FLAP ENDONUCLEASE FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004518
all species →		Molecular Functionnuclease activityInterproscan
GO:0000400
all species →		Molecular Functionfour-way junction DNA bindingInterproscan
GO:0017108
all species →		Molecular Function5'-flap endonuclease activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.1253.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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