Detailed information of evm.model.Ap4.1257 in Astrangia poculata

Genomic Location: Ap4:12959693...12961276
NR annotation: XP_020602199.1, von Hippel-Lindau tumor suppressor homolog [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006172 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01847
all species →		VHLVHL beta domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024053
all species →		Domainvon Hippel-Lindau disease tumour suppressor, beta domainInterproscan
IPR022772
all species →		Domainvon Hippel-Lindau disease tumour suppressor, beta/alpha domainInterproscan
IPR037140
all species →		Homologous_superfamilyvon Hippel-Lindau disease tumour suppressor, beta domain superfamilyInterproscan
IPR036208
all species →		Homologous_superfamilyVHL superfamilyInterproscan

 PANTHER
No PANTHER signature was detected for evm.model.Ap4.1257. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap4.1257. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K03871VHL; von Hippel-Lindau disease tumor supressor-Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP