Gene detail

Detailed information of evm.model.Ap4.1268 in Astrangia poculata

Genomic Location: Ap4:13076008...13085185
NR annotation: KAJ7392246.1, Follistatin- protein 5 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

evm.model.Ap4.1268

atgaaatgtaccgcactgactttggggataatcttctcaacatttcttctgcattacacggttcatggaggtgcaaaagaaagaaaaattaacttaacaaagaatataaaacattgctggcggctttgcccctctggtcaagaatgcgcgcttcagtcagacggcactgaacagtgtgtgtgtgcgtctcaatgtaaaaagagacacaaacccgtgtgtggaacagacggacacctgtacataaaccactgcgaattacacagaacagcgtgtgttaatggcaagaagattggcgtcgactggaacttgaaatgtttaaagaaacaagccaaaacaaaggattgtcccgaagagaaattatccgacatgaagaagctcattttatcagccttccaaagggagctgcacaaggaagtgacgtcaaaaatcctgatcgatgaactgttcttccggtataacagggaccgcgatcacagtatcagcagtttcgagctcaaaagcctggttactgactacgtcatgtatggcaacatcaaagaactcgcggacatgtgtcacccatcacagtggttgaatgctgcagacgaagaccaaaatgggtttctctccaaagatgaattttcacggagtctcgcgagcaaaccggaagttagcattctgcaaaatgacgagcaaccaatgtctggttccaatctcactctccgatgcagggtgcgtggttaccctgttcctacggtcacgtggttcaaagatgaaataccgctgaacgaagaaggggaactttttttaaaggggctcggtgtgggtgacaatggagtgtacacatgcgaggcctcaaatgatttgggagtggaccggaagcaagtgaaggttaacgtccaagaaccgatcacggaagctccagctgttccagggagtaaccttttttacgtcttcgcaaacgacggtgtttacgccatcgatcctgaaacgtcatcgactgtcaagcacatcacagctgatgacgtcataaatggcacagcatcgccaatttgcacgagtggtcgacagaaaacgtgcaactggggcggagctgtgagcgttaacttgaaatacatctacgcagcggacttcctggggaaacgagtcctagtgctggatattgcggctcaaaaattcgttcaaatagtaccaacagacgactatccctaccaactgaaatatatcaggtccctagatgctgtttggatcctgtgctgggaaagcagtgaccttgatatcctcactgaggacgaggacgacaacgggacactgtcagtgatagacgaagcaagtaaagtgactgtccacacgtcaatcaaggctcgaatgattgacggctacccacggcccgtgcatggcttctttgaggcggcgaactgcgagttgacagacgaggaaaccaagtatgcctacgtcactcatattatggaacctggccttcatgaagtggacctggctaccaagcagtactcgaagttttacaatcttagtgattaccagtgttacgggacatttagcttagctttgtctcagcctcacagatatgcgttcgtccagtgctacaccaatgaagaccgcgataccaaagcgcagatagtgatggatttaaaaaacgaagaaatcaaggcaataaactcaattcattttggcttgccattcgcatcccctgacggccggtttgtcattacattgaattattttgctattttaacccagtacattgacccgtcaggccagatttacctgttccaagacattgagtccaacctgttactcagcagcctcgccttctacccacgtgacgcgggttatgacgtatacgtgacgtcaaaggaccaatcggcaataatcctgcttcatgtggaccaaacaggtataaaaacactcaagtttatttccacagtcggcaagccatcgcaggacagggactgggtccacactcaacgctctattgtgattggctgcgaatctaacgttcgttacctagcaacggctgcaactggcgaggatgcagttgttattctggatggcgagaagcaggagatgggaggaaaggttacaggaattaagggggctcgcacaattgtgtgggtcggtagtaaatag

Transcript

evm.model.Ap4.1268

CAGTCTGTCTTTAAATCCCGGCGATATTTTGTATCTACTGGCAAATCAACACAATATACAACAAGTGTAATCAAGTATATTTCTGGTCGTGTGCAACGGAAGTCTTTTTTACACTCGGTTTGTTATTTCAAGAGAACATTCCGGCGTGCCCAACAACCGCGTCGCGAGACCGTAGCACGCGCAGTTTGTCTGTCGCTTTCAGTTTTCAGATTTAAATCCTCGCTGTACTCCAAGCTCGTACTGGCAGCGATGAAATGTACCGCACTGACTTTGGGGATAATCTTCTCAACATTTCTTCTGCATTACACGGTTCATGGAGGTGCAAAAGAAAGAAAAATTAACTTAACAAAGAATATAAAACATTGCTGGCGGCTTTGCCCCTCTGGTCAAGAATGCGCGCTTCAGTCAGACGGCACTGAACAGTGTGTGTGTGCGTCTCAATGTAAAAAGAGACACAAACCCGTGTGTGGAACAGACGGACACCTGTACATAAACCACTGCGAATTACACAGAACAGCGTGTGTTAATGGCAAGAAGATTGGCGTCGACTGGAACTTGAAATGTTTAAAGAAACAAGCCAAAACAAAGGATTGTCCCGAAGAGAAATTATCCGACATGAAGAAGCTCATTTTATCAGCCTTCCAAAGGGAGCTGCACAAGGAAGTGACGTCAAAAATCCTGATCGATGAACTGTTCTTCCGGTATAACAGGGACCGCGATCACAGTATCAGCAGTTTCGAGCTCAAAAGCCTGGTTACTGACTACGTCATGTATGGCAACATCAAAGAACTCGCGGACATGTGTCACCCATCACAGTGGTTGAATGCTGCAGACGAAGACCAAAATGGGTTTCTCTCCAAAGATGAATTTTCACGGAGTCTCGCGAGCAAACCGGAAGTTAGCATTCTGCAAAATGACGAGCAACCAATGTCTGGTTCCAATCTCACTCTCCGATGCAGGGTGCGTGGTTACCCTGTTCCTACGGTCACGTGGTTCAAAGATGAAATACCGCTGAACGAAGAAGGGGAACTTTTTTTAAAGGGGCTCGGTGTGGGTGACAATGGAGTGTACACATGCGAGGCCTCAAATGATTTGGGAGTGGACCGGAAGCAAGTGAAGGTTAACGTCCAAGAACCGATCACGGAAGCTCCAGCTGTTCCAGGGAGTAACCTTTTTTACGTCTTCGCAAACGACGGTGTTTACGCCATCGATCCTGAAACGTCATCGACTGTCAAGCACATCACAGCTGATGACGTCATAAATGGCACAGCATCGCCAATTTGCACGAGTGGTCGACAGAAAACGTGCAACTGGGGCGGAGCTGTGAGCGTTAACTTGAAATACATCTACGCAGCGGACTTCCTGGGGAAACGAGTCCTAGTGCTGGATATTGCGGCTCAAAAATTCGTTCAAATAGTACCAACAGACGACTATCCCTACCAACTGAAATATATCAGGTCCCTAGATGCTGTTTGGATCCTGTGCTGGGAAAGCAGTGACCTTGATATCCTCACTGAGGACGAGGACGACAACGGGACACTGTCAGTGATAGACGAAGCAAGTAAAGTGACTGTCCACACGTCAATCAAGGCTCGAATGATTGACGGCTACCCACGGCCCGTGCATGGCTTCTTTGAGGCGGCGAACTGCGAGTTGACAGACGAGGAAACCAAGTATGCCTACGTCACTCATATTATGGAACCTGGCCTTCATGAAGTGGACCTGGCTACCAAGCAGTACTCGAAGTTTTACAATCTTAGTGATTACCAGTGTTACGGGACATTTAGCTTAGCTTTGTCTCAGCCTCACAGATATGCGTTCGTCCAGTGCTACACCAATGAAGACCGCGATACCAAAGCGCAGATAGTGATGGATTTAAAAAACGAAGAAATCAAGGCAATAAACTCAATTCATTTTGGCTTGCCATTCGCATCCCCTGACGGCCGGTTTGTCATTACATTGAATTATTTTGCTATTTTAACCCAGTACATTGACCCGTCAGGCCAGATTTACCTGTTCCAAGACATTGAGTCCAACCTGTTACTCAGCAGCCTCGCCTTCTACCCACGTGACGCGGGTTATGACGTATACGTGACGTCAAAGGACCAATCGGCAATAATCCTGCTTCATGTGGACCAAACAGGTATAAAAACACTCAAGTTTATTTCCACAGTCGGCAAGCCATCGCAGGACAGGGACTGGGTCCACACTCAACGCTCTATTGTGATTGGCTGCGAATCTAACGTTCGTTACCTAGCAACGGCTGCAACTGGCGAGGATGCAGTTGTTATTCTGGATGGCGAGAAGCAGGAGATGGGAGGAAAGGTTACAGGAATTAAGGGGGCTCGCACAATTGTGTGGGTCGGTAGTAAATAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q62632	Follistatin-related protein 1 OS=Rattus norvegicus OX=10116 GN=Fstl1 PE=1 SV=1
Q62356	Follistatin-related protein 1 OS=Mus musculus OX=10090 GN=Fstl1 PE=1 SV=2
Q8N475	Follistatin-related protein 5 OS=Homo sapiens OX=9606 GN=FSTL5 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008903 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13927 all species →	Ig_3	Immunoglobulin domain	Domain	Interproscan
PF07648 all species →	Kazal_2	Kazal-type serine protease inhibitor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR036058 all species →	Homologous_superfamily	Kazal domain superfamily	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR002350 all species →	Domain	Kazal domain	Interproscan
IPR003598 all species →	Domain	Immunoglobulin subtype 2	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR050653 all species →	Family	Protease Inhibitors and Growth Factor Antagonists	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10913 all species →	FOLLISTATIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0007275 all species →	Biological Process	multicellular organism development	Interproscan
GO:0030154 all species →	Biological Process	cell differentiation	Interproscan
GO:0030510 all species →	Biological Process	regulation of BMP signaling pathway	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23915	FSTL5; follistatin-related protein 5	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.