Detailed information of evm.model.Ap4.1373 in Astrangia poculata

Genomic Location: Ap4:14455231...14458765
NR annotation: XP_020601271.1, prefoldin subunit 1-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3SZE2Prefoldin subunit 1 OS=Bos taurus OX=9913 GN=PFDN1 PE=2 SV=1
Q4SPU8Prefoldin subunit 1 OS=Tetraodon nigroviridis OX=99883 GN=pfdn1 PE=3 SV=1
O60925Prefoldin subunit 1 OS=Homo sapiens OX=9606 GN=PFDN1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009152 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01920
all species →		Prefoldin_2Prefoldin subunitCoiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002777
all species →		FamilyPrefoldin beta-likeInterproscan
IPR009053
all species →		Homologous_superfamilyPrefoldinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20903
all species →		PREFOLDIN SUBUNIT 1-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006457
all species →		Biological Processprotein foldingInterproscan
GO:0016272
all species →		Cellular Componentprefoldin complexInterproscan
GO:0051082
all species →		Molecular Functionunfolded protein bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0044183
all species →		Molecular Functionprotein folding chaperoneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K09548PFDN1; prefoldin subunit 1-Chaperones and folding catalystsko03110deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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