Detailed information of evm.model.Ap4.1390 in Astrangia poculata

Genomic Location: Ap4:14626819...14627706
NR annotation: PFX27046.1, Transposon Ty3-G Gag-Pol polyprotein [Stylophora pistillata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7LHG5Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2
Q99315Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3
Q9UR07Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000062 (this species only)

 Pfam domain
No Pfam domain signature was detected for evm.model.Ap4.1390. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR043128
all species →		Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502
all species →		Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR053134
all species →		FamilyRNA-directed DNA polymerase homologInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24559
all species →		TRANSPOSON TY3-I GAG-POL POLYPROTEINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap4.1390. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.1390.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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