Detailed information of evm.model.Ap4.140 in Astrangia poculata

Genomic Location: Ap4:1403781...1406054
NR annotation: CAH3150372.1, unnamed protein product [Pocillopora meandrina]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
F4HYF3Bifunctional D-cysteine desulfhydrase/1-aminocyclopropane-1-carboxylate deaminase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=DCD PE=1 SV=1
Q6ZHE5D-cysteine desulfhydrase 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=DCD1 PE=1 SV=2
Q9V2L2Putative 1-aminocyclopropane-1-carboxylate deaminase OS=Pyrococcus abyssi (strain GE5 / Orsay) OX=272844 GN=PYRAB00630 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001402 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00291
all species →		PALPPyridoxal-phosphate dependent enzymeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036052
all species →		Homologous_superfamilyTryptophan synthase beta chain-like, PALP domain superfamilyInterproscan
IPR001926
all species →		DomainTryptophan synthase beta chain-like, PALP domainInterproscan
IPR027278
all species →		Family1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydraseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43780
all species →		1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0019148
all species →		Molecular FunctionD-cysteine desulfhydrase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.140.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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