Detailed information of evm.model.Ap4.1497 in Astrangia poculata

Genomic Location: Ap4:15416280...15417170
NR annotation: XP_020608884.1, 25S rRNA adenine-N(1) methyltransferase-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9UUH225S rRNA adenine-N(1) methyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC630.10 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0011803 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF11968
all species →		Bmt225S rRNA (adenine(2142)-N(1))-methyltransferase, Bmt2 FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR021867
all species →		FamilyS-adenosylmethionine-dependent methyltransferase Bmt2-likeInterproscan
IPR029063
all species →		Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21008
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan
GO:0016433
all species →		Molecular FunctionrRNA (adenine) methyltransferase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K18849BMT2; 25S rRNA (adenine2142-N1)-methyltransferaseEC:2.1.1.286
Ribosome biogenesisko03009deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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