Detailed information of evm.model.Ap4.1511 in Astrangia poculata

Genomic Location: Ap4:15537408...15549214
NR annotation: CAH3031531.1, unnamed protein product [Pocillopora meandrina]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005522 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF20989
all species →		Sarcoglycan_2_CSarcoglycan alpha/epsilon second domainDomainInterproscan
PF05510
all species →		Sarcoglycan_2Sarcoglycan alpha/epsilon N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008908
all species →		FamilySarcoglycan alpha/epsilonInterproscan
IPR015919
all species →		Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR048347
all species →		DomainSarcoglycan alpha/epsilon second domainInterproscan
IPR048346
all species →		DomainSarcoglycan alpha/epsilon, N-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10132
all species →		ALPHA-/EPSILON-SARCOGLYCAN FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016012
all species →		Cellular Componentsarcoglycan complexInterproscan
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.1511.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP