Detailed information of evm.model.Ap4.1560 in Astrangia poculata

Genomic Location: Ap4:16176035...16186606
NR annotation: KAJ7376470.1, Acyl-coenzyme A synthetase acsm4, mitochondrial-like [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P0C7M7Acyl-coenzyme A synthetase ACSM4, mitochondrial OS=Homo sapiens OX=9606 GN=ACSM4 PE=1 SV=1
Q53FZ2Acyl-coenzyme A synthetase ACSM3, mitochondrial OS=Homo sapiens OX=9606 GN=ACSM3 PE=1 SV=2
Q5REV5Acyl-coenzyme A synthetase ACSM3, mitochondrial OS=Pongo abelii OX=9601 GN=ACSM3 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001394 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13193
all species →		AMP-binding_CAMP-binding enzyme C-terminal domainDomainInterproscan
PF00501
all species →		AMP-bindingAMP-binding enzymeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045851
all species →		Homologous_superfamilyAMP-binding enzyme, C-terminal domain superfamilyInterproscan
IPR025110
all species →		DomainAMP-binding enzyme, C-terminal domainInterproscan
IPR051087
all species →		FamilyMitochondrial Acyl-CoA Synthetase Medium-ChainInterproscan
IPR000873
all species →		DomainAMP-dependent synthetase/ligase domainInterproscan
IPR042099
all species →		Homologous_superfamilyANL, N-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43605
all species →		ACYL-COENZYME A SYNTHETASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004321
all species →		Molecular Functionfatty-acyl-CoA synthase activityInterproscan
GO:0005759
all species →		Cellular Componentmitochondrial matrixInterproscan
GO:0006633
all species →		Biological Processfatty acid biosynthetic processInterproscan
GO:0006637
all species →		Biological Processacyl-CoA metabolic processInterproscan
GO:0015645
all species →		Molecular Functionfatty acid ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.1560.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP