Detailed information of evm.model.Ap4.16 in Astrangia poculata

Genomic Location: Ap4:153709...167003
NR annotation: PFX33553.1, Caspase-3 [Stylophora pistillata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q60431Caspase-3 OS=Mesocricetus auratus OX=10036 GN=CASP3 PE=2 SV=1
P55213Caspase-3 OS=Rattus norvegicus OX=10116 GN=Casp3 PE=2 SV=2
Q8MJC3Caspase-3 OS=Oryctolagus cuniculus OX=9986 GN=CASP3 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001243 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00619
all species →		CARDCaspase recruitment domainDomainInterproscan
PF00656
all species →		Peptidase_C14Caspase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011029
all species →		Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR001315
all species →		DomainCARD domainInterproscan
IPR002138
all species →		DomainPeptidase C14, caspase non-catalytic subunit p10Interproscan
IPR029030
all species →		Homologous_superfamilyCaspase-like domain superfamilyInterproscan
IPR015917
all species →		DomainPeptidase C14A, caspase catalytic domainInterproscan
IPR033139
all species →		Active_sitePeptidase family C14A, cysteine active siteInterproscan
IPR011600
all species →		DomainPeptidase C14, caspase domainInterproscan
IPR001309
all species →		DomainPeptidase C14, p20 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10454
all species →		CASPASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0042981
all species →		Biological Processregulation of apoptotic processInterproscan
GO:0004197
all species →		Molecular Functioncysteine-type endopeptidase activityInterproscan
GO:0006508
all species →		Biological ProcessproteolysisInterproscan
GO:0008234
all species →		Molecular Functioncysteine-type peptidase activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0006915
all species →		Biological Processapoptotic processInterproscan
GO:0043525
all species →		Biological Processpositive regulation of neuron apoptotic processInterproscan
GO:0097153
all species →		Molecular Functionobsolete cysteine-type endopeptidase activity involved in apoptotic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.16.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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