Genomic Location: Ap4:1672422...1688159
NR annotation: XP_020618532.1, soluble guanylate cyclase 88E-like isoform X1 [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families
| CDS |
| evm.model.Ap4.166 |
| Transcript |
| evm.model.Ap4.166 |
| Protein |
| evm.model.Ap4.166 |
| UniProt accession | Description |
|---|---|
| Q8INF0 | Soluble guanylate cyclase 88E OS=Drosophila melanogaster OX=7227 GN=Gyc88E PE=1 SV=4 |
| Q86C56 | Soluble guanylate cyclase gcy-31 OS=Caenorhabditis elegans OX=6239 GN=gcy-31 PE=2 SV=2 |
| Q9VEU6 | Soluble guanylate cyclase 89Da OS=Drosophila melanogaster OX=7227 GN=Gyc89Da PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0001391 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF07700 all species → | HNOB | Haem-NO-binding | Domain | Interproscan |
| PF07701 all species → | HNOBA | Heme NO binding associated | Domain | Interproscan |
| PF00211 all species → | Guanylate_cyc | Adenylate and Guanylate cyclase catalytic domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001054 all species → | Domain | Adenylyl cyclase class-3/4/guanylyl cyclase | Interproscan |
| IPR029787 all species → | Homologous_superfamily | Nucleotide cyclase | Interproscan |
| IPR011644 all species → | Domain | Heme NO-binding | Interproscan |
| IPR011645 all species → | Domain | Haem NO binding associated | Interproscan |
| IPR024096 all species → | Homologous_superfamily | NO signalling/Golgi transport ligand-binding domain superfamily | Interproscan |
| IPR038158 all species → | Homologous_superfamily | H-NOX domain superfamily | Interproscan |
| IPR042463 all species → | Homologous_superfamily | Haem NO binding associated domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45655 all species → | GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0009190 all species → | Biological Process | cyclic nucleotide biosynthetic process | Interproscan |
| GO:0035556 all species → | Biological Process | intracellular signal transduction | Interproscan |
| GO:0020037 all species → | Molecular Function | heme binding | Interproscan |
| GO:0004383 all species → | Molecular Function | guanylate cyclase activity | Interproscan |
| GO:0006182 all species → | Biological Process | cGMP biosynthetic process | Interproscan |
| GO:0008074 all species → | Cellular Component | guanylate cyclase complex, soluble | Interproscan |
| GO:0019934 all species → | Biological Process | cGMP-mediated signaling | Interproscan |
| GO:0038060 all species → | Biological Process | nitric oxide-cGMP-mediated signaling | Interproscan |
| GO:0070482 all species → | Biological Process | response to oxygen levels | Interproscan |
evm.model.Ap4.166.Transcript abundance of evm.model.Ap4.166 across 49 RNA-seq samples of Astrangia poculata. This gene has no row in the species' RNA-seq expression matrix, so every value below is shown as zero — the matrix simply does not cover this transcript. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.
| Condition | Samples | TPM > 0 | Mean TPM | Max TPM | Mean, relative to max |
|---|---|---|---|---|---|
| whole organism · cold control | 14 | 0 | 0.00 | 0.00 | |
| whole organism · heat control | 12 | 0 | 0.00 | 0.00 | |
| whole organism · cold challenge | 12 | 0 | 0.00 | 0.00 | |
| whole organism · heat challenge | 11 | 0 | 0.00 | 0.00 |
Source: CnidoSite RNA-seq expression matrices (APOCU_TPM,
StringTie quantification over 49 runs), joined to SRA sample
metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped
by the descriptor carried in the expression matrix itself.
