Detailed information of evm.model.Ap4.1665 in Astrangia poculata

Genomic Location: Ap4:16837236...16844719
NR annotation: KAJ7370748.1, hypothetical protein OS493_030177 [Desmophyllum pertusum]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000535 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13229
all species →		Beta_helixRight handed beta helix regionRepeatInterproscan
PF00530
all species →		SRCRScavenger receptor cysteine-rich domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001190
all species →		DomainSRCR domainInterproscan
IPR053243
all species →		FamilySeptate junction maturation regulatorInterproscan
IPR017448
all species →		DomainSRCR-like domainInterproscan
IPR006626
all species →		RepeatParallel beta-helix repeatInterproscan
IPR036772
all species →		Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR012334
all species →		Homologous_superfamilyPectin lyase foldInterproscan
IPR039448
all species →		DomainRight handed beta helix domainInterproscan
IPR011050
all species →		Homologous_superfamilyPectin lyase fold/virulence factorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47653
all species →		PROTEIN BARK BEETLEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →		Cellular ComponentmembraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.1665.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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