Detailed information of evm.model.Ap4.169 in Astrangia poculata

Genomic Location: Ap4:1745899...1748199
NR annotation: CAH3188937.1, unnamed protein product, partial [Porites evermanni]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q66J69E3 ubiquitin-protein ligase RING2-A OS=Xenopus laevis OX=8355 GN=rnf2-a PE=2 SV=1
Q5TJF3E3 ubiquitin-protein ligase RING1 OS=Canis lupus familiaris OX=9615 GN=RING1 PE=3 SV=2
Q06587E3 ubiquitin-protein ligase RING1 OS=Homo sapiens OX=9606 GN=RING1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006742 (this species only)

 Pfam domain
No Pfam domain signature was detected for evm.model.Ap4.169. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR043540
all species →		FamilyE3 ubiquitin-protein ligase RING1/RING2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46076
all species →		E3 UBIQUITIN-PROTEIN LIGASE RING1 / RING 2 FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000151
all species →		Cellular Componentubiquitin ligase complexInterproscan
GO:0003682
all species →		Molecular Functionchromatin bindingInterproscan
GO:0031519
all species →		Cellular ComponentPcG protein complexInterproscan
GO:0061630
all species →		Molecular Functionubiquitin protein ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.169.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP