Detailed information of evm.model.Ap4.1726 in Astrangia poculata

Genomic Location: Ap4:17447038...17450678
NR annotation: XP_020630135.1, netrin-1-like [Orbicella faveolata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P02468Laminin subunit gamma-1 OS=Mus musculus OX=10090 GN=Lamc1 PE=1 SV=2
A0JP86Laminin subunit gamma-1 OS=Xenopus tropicalis OX=8364 GN=lamc1 PE=2 SV=1
P11047Laminin subunit gamma-1 OS=Homo sapiens OX=9606 GN=LAMC1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002658 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00053
all species →		Laminin_EGFLaminin EGF domainDomainInterproscan
PF00055
all species →		Laminin_NLaminin N-terminal (Domain VI)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002049
all species →		DomainLaminin-type EGF domainInterproscan
IPR008211
all species →		DomainLaminin, N-terminalInterproscan
IPR050440
all species →		FamilyLaminin/Netrin Extracellular MatrixInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10574
all species →		NETRIN/LAMININ-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0009887
all species →		Biological Processanimal organ morphogenesisInterproscan
GO:0009888
all species →		Biological Processtissue developmentInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.1726.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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