Detailed information of evm.model.Ap4.1765 in Astrangia poculata

Genomic Location: Ap4:17789316...17790471
NR annotation: KXJ07604.1, Retrovirus-related Pol polyprotein from transposon 17.6 [Exaiptasia diaphana]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000002 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13650
all species →		Asp_protease_2Aspartyl proteaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001995
all species →		DomainPeptidase A2A, retrovirus, catalyticInterproscan
IPR043128
all species →		Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502
all species →		Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR021109
all species →		Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR050951
all species →		FamilyRetrovirus-related Pol polyproteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984
all species →		PROTEIN CBG26694Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004190
all species →		Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508
all species →		Biological ProcessproteolysisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.1765.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP