Detailed information of evm.model.Ap4.1924 in Astrangia poculata

Genomic Location: Ap4:19101195...19103156
NR annotation: PFX17945.1, Retrovirus-related Pol polyprotein [Stylophora pistillata]
Species Astrangia poculata · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P92523Uncharacterized mitochondrial protein AtMg00860 OS=Arabidopsis thaliana OX=3702 GN=AtMg00860 PE=4 SV=1
P04323Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
Q8I7P9Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000010 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13975
all species →		gag-asp_proteasgag-polyprotein putative aspartyl proteaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR021109
all species →		Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR043128
all species →		Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR050951
all species →		FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043502
all species →		Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984
all species →		PROTEIN CBG26694Interproscan

 Gene Ontology
No Gene Ontology signature was detected for evm.model.Ap4.1924. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.1924.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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