Detailed information of evm.model.Ap4.199.1.5f15dd71 in Astrangia poculata

Genomic Location: Ap4:2125306...2140133
NR annotation: KAJ7380785.1, LIM domain-containing protein 2 [Desmophyllum pertusum]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9BT23LIM domain-containing protein 2 OS=Homo sapiens OX=9606 GN=LIMD2 PE=1 SV=1
Q1LZA7LIM domain-containing protein 2 OS=Bos taurus OX=9913 GN=LIMD2 PE=2 SV=1
Q4KM31LIM domain-containing protein 2 OS=Rattus norvegicus OX=10116 GN=Limd2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003600 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00412
all species →		LIMLIM domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001781
all species →		DomainZinc finger, LIM-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24206
all species →		OS06G0237300 PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0015629
all species →		Cellular Componentactin cytoskeletonInterproscan
GO:0051015
all species →		Molecular Functionactin filament bindingInterproscan
GO:0051017
all species →		Biological Processactin filament bundle assemblyInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.199.1.5f15dd71.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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