Detailed information of evm.model.Ap4.2116 in Astrangia poculata

Genomic Location: Ap4:19834199...19835524
NR annotation: XP_020610676.1, ankyrin repeat and LEM domain-containing protein 1-like [Orbicella faveolata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8NAG6Ankyrin repeat and LEM domain-containing protein 1 OS=Homo sapiens OX=9606 GN=ANKLE1 PE=1 SV=2
A8VU90Ankyrin repeat and LEM domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ankle1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005492 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03020
all species →		LEMLEM domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003887
all species →		DomainLEM domainInterproscan
IPR011015
all species →		Homologous_superfamilyLEM/LEM-like domain superfamilyInterproscan
IPR034998
all species →		FamilyAnkyrin repeat and LEM domain-containing protein 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46427
all species →		ANKYRIN REPEAT AND LEM DOMAIN-CONTAINING PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000712
all species →		Biological Processresolution of meiotic recombination intermediatesInterproscan
GO:0000724
all species →		Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0004519
all species →		Molecular Functionendonuclease activityInterproscan
GO:0004520
all species →		Molecular FunctionDNA endonuclease activityInterproscan
GO:0005654
all species →		Cellular ComponentnucleoplasmInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.2116.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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