Detailed information of evm.model.Ap4.2268 in Astrangia poculata

Genomic Location: Ap4:20721870...20722418
NR annotation: PFX33469.1, Heterochromatin protein 1 [Stylophora pistillata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P05205Heterochromatin protein 1 OS=Drosophila melanogaster OX=7227 GN=Su(var)205 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001561 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00385
all species →		ChromoChromo (CHRromatin Organisation MOdifier) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051219
all species →		FamilyHeterochromatin-associated chromo domain-containing proteinInterproscan
IPR000953
all species →		DomainChromo/chromo shadow domainInterproscan
IPR016197
all species →		Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR023780
all species →		DomainChromo domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22812
all species →		CHROMOBOX PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000122
all species →		Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0003682
all species →		Molecular Functionchromatin bindingInterproscan
GO:0005721
all species →		Cellular Componentpericentric heterochromatinInterproscan
GO:0006325
all species →		Biological Processchromatin organizationInterproscan
GO:0035064
all species →		Molecular Functionmethylated histone bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.2268.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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