Detailed information of evm.model.Ap4.277 in Astrangia poculata

Genomic Location: Ap4:2680732...2690549
NR annotation: XP_027053571.1, vacuolar protein sorting-associated protein 26B-like [Pocillopora damicornis]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8C0E2Vacuolar protein sorting-associated protein 26B OS=Mus musculus OX=10090 GN=Vps26b PE=1 SV=1
Q4G0F5Vacuolar protein sorting-associated protein 26B OS=Homo sapiens OX=9606 GN=VPS26B PE=1 SV=2
Q5BKM4Vacuolar protein sorting-associated protein 26B OS=Xenopus tropicalis OX=8364 GN=vps26b PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007601 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03643
all species →		Vps26Vacuolar protein sorting-associated protein 26 FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014752
all species →		Homologous_superfamilyArrestin-like, C-terminalInterproscan
IPR028934
all species →		FamilyVacuolar protein sorting protein 26 relatedInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12233
all species →		VACUOLAR PROTEIN SORTING 26 RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005768
all species →		Cellular ComponentendosomeInterproscan
GO:0006886
all species →		Biological Processintracellular protein transportInterproscan
GO:0030904
all species →		Cellular Componentretromer complexInterproscan
GO:0042147
all species →		Biological Processretrograde transport, endosome to GolgiInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K18466VPS26A_B; vacuolar protein sorting-associated protein 26A/B-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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