Detailed information of evm.model.Ap4.3130 in Astrangia poculata

Genomic Location: Ap4:25032543...25033634
NR annotation: CAB3986317.1, Transposable element Tcb1 transposase [Paramuricea clavata]
Species abbreviation APOCU · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P34257Transposable element Tc3 transposase OS=Caenorhabditis elegans OX=6239 GN=tc3a PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000182 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13358
all species →		DDE_3DDE superfamily endonucleaseDomainInterproscan
PF01498
all species →		HTH_Tnp_Tc3_2TransposaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036397
all species →		Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR052338
all species →		FamilyTransposase_5Interproscan
IPR038717
all species →		DomainTc1-like transposase, DDE domainInterproscan
IPR002492
all species →		DomainTransposase, Tc1-likeInterproscan
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23022
all species →		TRANSPOSABLE ELEMENT-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →		Molecular Functionnucleic acid bindingInterproscan
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0006313
all species →		Biological ProcessDNA transpositionInterproscan
GO:0015074
all species →		Biological ProcessDNA integrationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for evm.model.Ap4.3130.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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